| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1345 |
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| Symbol | |
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| ID | 6115585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1694279 |
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| End bp | 1695103 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632833 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001759732 |
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| Protein GI | 170725706 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000767633 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000248019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAACT TGGAAGGTTT GTTCGAGCAA GTGCCTGAGC TTGTCGTGAC ATATGGAATG
AAAATCCTCT TAGCAATTGT TATTTTTGTT ATCGGTAAAT ATTTATCGGG ACTGGCGAAA
AAGATAACCT GTAAGTTGCT ACTTAAGAGA AAGATAGATG AAACTGTCGT CTCTTTTGTG
GGGAATATGG CATGGGCACT AGTCTTCGTG TTCACTATTG TGGCAACGCT TGGGCAGATC
GGTGTACAAA CAGCTTCTTT GGTTGCAGTA ATAGGTGCCG CGGGCTTAGC CGTTGGTCTT
GCACTTCAAG GTTCACTCTC TAACTTTGCT TCAGGGGTGT TAATGGTGCT ATTCCGTCCT
TGTCGCGTTG GTGATTATGT TGAGGCTGCA GGCATTGCCG GAACCGTTAA TGAGATCACT
ATCTTCTCAA CTAAGTTACT AACACCTGAC AACAAGCTTA TTATCGCGCC TAACTCAGCC
ATGATGGATG GGACGATAAT TAACTATTCT GCGATGGATA CACGTCGTGT TGATCTGGTG
ATTGGTGTCT CTTATGACGC TAACTTGGCC GATGTCAGAA AGATCCTGAC TCAAATAGTT
GAAAATAATC AGTACGTTCT AAAAGACCCT GCTTACACTA TTGCAGTTGC TGAATTGGCT
GACTCTTCTG TTAACTTTGT TGTTCGCCCT TGGGTTAAAG GCAGTGACTA CTGGCCTGCG
CACTTTGAGC TGCTAGAGCA GATTAAGATC GCACTGGATG AAGCCAATAT CGGTATTCCA
TATCCACAAA TGGATCTATA CCTGAAGGAA ACACCAGCTG CATAA
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| Protein sequence | MENLEGLFEQ VPELVVTYGM KILLAIVIFV IGKYLSGLAK KITCKLLLKR KIDETVVSFV
GNMAWALVFV FTIVATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA SGVLMVLFRP
CRVGDYVEAA GIAGTVNEIT IFSTKLLTPD NKLIIAPNSA MMDGTIINYS AMDTRRVDLV
IGVSYDANLA DVRKILTQIV ENNQYVLKDP AYTIAVAELA DSSVNFVVRP WVKGSDYWPA
HFELLEQIKI ALDEANIGIP YPQMDLYLKE TPAA
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