Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1344 |
Symbol | |
ID | 6115584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1693588 |
End bp | 1694160 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632832 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001759731 |
Protein GI | 170725705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00124071 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000223206 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAAAGC GAGCGGGTGT CTGTTTTATT CTCTCTATTG GGTTGCTGTT TTGCTTGTCT GCTTCGGCAT GGACATGGAC GGATAGTGAT GGAGATGGGG TTCCAGATGC TAAGGATGCC TGCCCTGAAA CCAAAGTCGG AGTCATAGTT CGCTCTAACG GATGTGGCGT ACAAGTCGAT ACTGATAGGC TCTGTTTACC GACTTTGGAT GAGCAGTTTT ATCCGCGGAC ATGTACTCAA GCTACCCCTT TAGTGTTGAA CTTCGAGTTT GCTCAGGCTG AGGTGATGTT TGCTCAGTGG CAGGTGTTTA CTCGTATTAA GCGTTTTCTT CAAGAGCATG ACGTTAAGTT GTGTTTACTT GGGCATACAG ACTCAGTTGG TGCAGAAGCT GGTAATATGG CGCTATCTCA TCTTCGGGCT CTCAATGTAA AGCGGATTTT GGTTGATGAT TTAGGGTTTA ATCCAGATCG ATTCCAAGTT AAAGGCATGG CTGACACTCA CCCAGTGGCT AGCAATGATT TCCCTGAGGG GAGGGCGATG AATCGTCGAG TTGAGCTGTT CGTTGAGCCT TAG
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Protein sequence | MIKRAGVCFI LSIGLLFCLS ASAWTWTDSD GDGVPDAKDA CPETKVGVIV RSNGCGVQVD TDRLCLPTLD EQFYPRTCTQ ATPLVLNFEF AQAEVMFAQW QVFTRIKRFL QEHDVKLCLL GHTDSVGAEA GNMALSHLRA LNVKRILVDD LGFNPDRFQV KGMADTHPVA SNDFPEGRAM NRRVELFVEP
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