Gene Swoo_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1335 
Symbol 
ID6115575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1687547 
End bp1688578 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID641632823 
Productferrochelatase 
Protein accessionYP_001759722 
Protein GI170725696 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000441416 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCTAAAT ATTCAGGTTT ATCGAAAGAC GTGGCACACA CTAAGCGGGG CAAGACAGGT 
GTTGTGTTGG TTAACCTTGG CACACCCGAT GCACCAACAG CTTCTGCTGT AAGGTGTTAT
TTGGCTGAAT TCTTGTCAGA TCCAAGGGTT GTTGAGATCC CCAAATTAGT GTGGATGTTG
ATTCTACATG GCATTATCTT GCGTATTAGA CCTGCAAAAT CAGCTGCACT TTATAAGCAG
GTTTGGACTG ATAAGGGGTC TCCACTGATG GAGATAACTC GCCAGCAGAC AGAGAAACTC
GCAAGCTACC TCAAAGACAA TGCTGGCGAG CTAGCAGGTG AGCAAGATAT CAGTGTTGAG
TTTTGTATGC GTTACGGTAA CCCTTCGGTA TCAGAAACCT TAAAGCAGAT GCACAGTGAG
GGAGTGGATA AGATGGTGGT TCTGCCTCTC TATCCTCAAT ATGCTGCGCC TACAACCGGC
TCGGTATTTG ATGCGATAGC CAAGGAGTTA ACTAGCTGGC GCTACCTTCC TTCACTGCAC
TTTATCAATA CTTATCATCA GCATCCAGAC TTTATTCATG CCTTGGTTGA ATCGATAAAA
CGTGATTTTG CTAGCAATGG TCAACCTCAA AAGCTAGTGA TGTCATACCA TGGTATGCCG
GAGCGAAACT TGCACCTTGG TGATCCGTAC TACTGTTTCT GCATGCAGAC GACTAAACTT
GTGGTTGAGC AGTTAGGCTT AAATGAGGAT CAGTATATTG CGACTTTTCA GTCTAGATTT
GGCAAAGCAA AATGGCTAAC GCCCTATACT GATGCAACTA TGGAGTCTCT TCCTGGGCAA
GATATTAAAG ATATCGCAGT TGTGTGCCCG GCATTTAGTG CTGATTGTTT AGAAACACTG
GAAGAGATCG CCGAAGAGAA CAGGCTTATA TTTGAAGAGG CGGGTGGTCA ACAGTACCGC
TATATTCCCG CATTGAATGA TGACGAGTTA CATATCAAGA TGATGGCAAA TTTAGTTAAG
CCTTATCTTT AA
 
Protein sequence
MAKYSGLSKD VAHTKRGKTG VVLVNLGTPD APTASAVRCY LAEFLSDPRV VEIPKLVWML 
ILHGIILRIR PAKSAALYKQ VWTDKGSPLM EITRQQTEKL ASYLKDNAGE LAGEQDISVE
FCMRYGNPSV SETLKQMHSE GVDKMVVLPL YPQYAAPTTG SVFDAIAKEL TSWRYLPSLH
FINTYHQHPD FIHALVESIK RDFASNGQPQ KLVMSYHGMP ERNLHLGDPY YCFCMQTTKL
VVEQLGLNED QYIATFQSRF GKAKWLTPYT DATMESLPGQ DIKDIAVVCP AFSADCLETL
EEIAEENRLI FEEAGGQQYR YIPALNDDEL HIKMMANLVK PYL