Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1328 |
Symbol | |
ID | 6115568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1682058 |
End bp | 1682492 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641632816 |
Product | hypothetical protein |
Protein accession | YP_001759715 |
Protein GI | 170725689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00762058 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAAAAG CCATATTATC AGCACTAATT CTAAGCCTTG CTTTGGTTGG CAATGTTTCA GCAGAGCAAA AACAGAAGAT TGGCAATTTT GATATCCACT ATGTCGCGTT AAGCAGCACT TTTCTGACGC CTAGCATAGC TAAATCCTAT GGAATTAAAC GCAGTAGTTA CACCGGCATC ATCAATATCT CAGTTTTGGA CACTAGCCAG GAGGGTAACC CTGCTGTCCC AGTCCAAATT TCAGGTGTTG CTAACAATCT ATTAGATGCA CGCATCACCC TAAAATTCAG AGAGATCCGT GAAGGTGAAG CTATCTATTA TATTGCCGAA GTGCCCTATC GTGATGATCA GGAGATCAAC TTCAACATTG CGATACAATA CGCAAAGAAG CTTAATACTC AGCTGAAATT TAAACAAAAG TTCTATGTAG AGTAA
|
Protein sequence | MLKAILSALI LSLALVGNVS AEQKQKIGNF DIHYVALSST FLTPSIAKSY GIKRSSYTGI INISVLDTSQ EGNPAVPVQI SGVANNLLDA RITLKFREIR EGEAIYYIAE VPYRDDQEIN FNIAIQYAKK LNTQLKFKQK FYVE
|
| |