Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1311 |
Symbol | |
ID | 6115546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1659911 |
End bp | 1662577 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632794 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_001759698 |
Protein GI | 170725672 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000578647 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTA AATTACTGAC AGCCGCCATT ACTCTGGTAC TGGCCACAAG TGGCTGCTCC GATAATAGTA AGGTGAATGA TAATAAACCA GTCACGCAAA CTAAAGCTCA AAGCGCTGAG GCGATGACTC AAGCGGTATT AAATCAACTG GGTGAGACCC TTGATGTTAA GTATCGATTG CTGACCAATT TTCCTGAAGG TTGCCCAACA GAGGGAGTCG ACGGCCGATG CTTTAGTGCT CAAATAGATT TAACCTCTAA AGTGGATCTC TCAAGTGCAG ATTGGGCTAT CTATTATAGC CAGATGAGGC CTGTGCAAAA GGTGTTATCT GAAGAGTTCG AGATAACACG GGTGAAGGGG GATCTTCATA AAATCACACC AACAGCCGCA TTTACTGGTT TAAAAGCAGG TCAGACTAAA ACTATCGATT TTAGGGGAGA GCTGTGGCAA CTATCTGAAA TTGATGCGAT GCCAAACTAT TATTTAATCT CTGGCGATTT AACTCCCGCA TTAATTAAAA GCACGACCGT TACCCATGAT CCCGAGACTG GCATGGAGTT AAGGCCCTAC GTTGCAGACT TTACTGATGC TGATACTCAA TATAAGCGCA GTGATACTGA TTTAATAAAA TGGGCTACTC CTGAGGTTTT GTTCCAAGCT AATCAGGGCG TAGAGTTACA AACTGGCGCT GCAACAAATA CCATCATACC GACACCGTTA AAGGTTGAGG TCACATCAGA GAATAAGCCT GTTTCACTTG GAGCGGGAAT AAAGCTGGTA CTTAACGCTC AAGCTAGGGG CCCTATAGAT GCCGCGCTAA AGCGACTCGC TAGACTTGGC GTGACTGAGT CTGATAAAGG CTTGCCTGTT GTGCTTAATA CGCTTAAAGA CTCCACTCAA GCGGGAGCGT ATCAGTTAGC TATCACAGAG CAAGGTATTG AGCTTACAGC TGCTGATGAT GCAGGTTTTT CTTATGGTTT GTCCTCTCTG ACAAGCTTGA TTGATAGCCA AGATCTGTCG ATTAATACCA TGTTGGTTGA AGATGCACCA AGGTATGACT TTCGTGGCAT GCATATTGAT GTTTCCCGTA ATTTTCACTC TAAGCAGCTG ATACTGGATA TGCTAGATCA GATGGCGGCT TATAAGTTGA ATAAGCTGCA TCTGCATATG GCCGATGATG AGGGTTGGCG TCTGGAGATT GATGGTCTCC CTGAGTTGAC CGATATTGGC AGTAAGCGCT GCCATGATAT AAGTGAAACC ACCTGTTTGC TGCCTCAGCT TGGTAGTGGG CCTTCAGCTG ATACCCAGGT AAGTGGTTAC TACTCTAAAG CCGATTATAT TGAAATTTTG AAATATGCAT CGGCAAGACA GATCCAAGTT ATCCCCTCGA TGGATATGCC GGGCCACTCT AGAGCCGCGA TTAAATCCAT GGATGCTCGC TATAAGAAAT TTATGGCAGA GGGTAATGAA ACGGCCGCAA AAGAGTACCT GTTAACTGAT CCCGACGATA AAACTGTCTA TTCATCTATT CAGTATTATG ACGACAATAC GCTTAATGTT TGTCTAGAAT CGACTTTCCA CTTTGTTGAT AAAGTCATTG ATGAGATTGC CAAGCTTCAT AAGGATGCTG GTCAACCCCT CACTCTCTAT CATATTGGCG CCGACGAAAC TGCGGGTGCT TGGCTTGAGT CGCCACAATG TAAGGCGTTT GTAGCCAATA ATGTGCAGGG TGTCACCTCA TTTGATGAAC TTGGTGCCTA CTTTGTTGAG CGTGTTTCAA ACACGCTTAA TGACAAAGGA ATTGAGCCTG CGGGTTGGAG TGATGGTATG AGCCATACAC GTCCAGATAA AATGCCGAAA AAGTCTCAGT CTAATCTTTG GGACGTTATC TCCCACGGCG GACATAATCG AGCTCATGAA CAGGTGAATC TTGGCTGGGA TGCGGTGTTA GGTACACCAG AAATGCTCTA TTTCGACTTT CCCTACGAAG CAGACCCTAA GGAGCATGGC TACTACTGGG CGAGTCGTAA TACCAATGAG CGTAAATTAT ATGGCTTTAT GCCTGATAAT TTGCCGGCAA ATGCGGAGCA GTGGACCGAT ATTCAGGGGC AGCCGTTTGA AGTTGATGAT ACCGAGAAGC TGGATGACAG TGGAAAGCGT ATCAGCGGTC CTATTGCGCA AGGTAAAGGC TTTGCCGGGC TACAGGGGCA GATCTGGAGT GAAACTTTAA GAAGCGATGA ACTGGTTGAG TATATGACCT TTCCAAGATT GCTGATTTTA GCCGAGAAAG CTTGGCACAA AGCGAGCTGG GAGGTGCCTT ATCAATACAC TGGTGCTGTC TATAATCAAA CTACTGAGTT CTTTACTCAA GAGATGCGTG CCAGTCAGGC TAAGCAGTGG GCTGTTATTG CTAACACTTT AGGGCAAAAA GAGCTCATTA AGCTGGATAT GGCGGGTATC GATTATCGAG TGCCTACAGT TGGGGCTCAT ATTCATGAAG GAGAGCTTCA TACTAACATC ATCTATCCAG GGCTTAAGAT TGAGTATCGA ATAGACGGTG GCAAGTGGGA GGCGTTCAAG TCACCTGTCG CGGTTAAAGG GATGGTTGAG GTAAGGGCTC TTGCTGCTGA CGGCACGAGG AAGGGACGAA CTTTAGAGGT TAAGTAA
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Protein sequence | MKLKLLTAAI TLVLATSGCS DNSKVNDNKP VTQTKAQSAE AMTQAVLNQL GETLDVKYRL LTNFPEGCPT EGVDGRCFSA QIDLTSKVDL SSADWAIYYS QMRPVQKVLS EEFEITRVKG DLHKITPTAA FTGLKAGQTK TIDFRGELWQ LSEIDAMPNY YLISGDLTPA LIKSTTVTHD PETGMELRPY VADFTDADTQ YKRSDTDLIK WATPEVLFQA NQGVELQTGA ATNTIIPTPL KVEVTSENKP VSLGAGIKLV LNAQARGPID AALKRLARLG VTESDKGLPV VLNTLKDSTQ AGAYQLAITE QGIELTAADD AGFSYGLSSL TSLIDSQDLS INTMLVEDAP RYDFRGMHID VSRNFHSKQL ILDMLDQMAA YKLNKLHLHM ADDEGWRLEI DGLPELTDIG SKRCHDISET TCLLPQLGSG PSADTQVSGY YSKADYIEIL KYASARQIQV IPSMDMPGHS RAAIKSMDAR YKKFMAEGNE TAAKEYLLTD PDDKTVYSSI QYYDDNTLNV CLESTFHFVD KVIDEIAKLH KDAGQPLTLY HIGADETAGA WLESPQCKAF VANNVQGVTS FDELGAYFVE RVSNTLNDKG IEPAGWSDGM SHTRPDKMPK KSQSNLWDVI SHGGHNRAHE QVNLGWDAVL GTPEMLYFDF PYEADPKEHG YYWASRNTNE RKLYGFMPDN LPANAEQWTD IQGQPFEVDD TEKLDDSGKR ISGPIAQGKG FAGLQGQIWS ETLRSDELVE YMTFPRLLIL AEKAWHKASW EVPYQYTGAV YNQTTEFFTQ EMRASQAKQW AVIANTLGQK ELIKLDMAGI DYRVPTVGAH IHEGELHTNI IYPGLKIEYR IDGGKWEAFK SPVAVKGMVE VRALAADGTR KGRTLEVK
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