| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1307 |
|---|
| Symbol | |
|---|
| ID | 6115542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1655279 |
|---|
| End bp | 1655995 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641632790 |
|---|
| Product | SapC family protein |
|---|
| Protein accession | YP_001759694 |
|---|
| Protein GI | 170725668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.537479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA TCTCTCCATT GAATTCATCA AAACACCTCA ATACCTACAT TAAAGAATCT
AAAGACTTCA GTCGCTTTGC TGCGCAGAGC TTGATCCCTA TTGTAGTGCA AGAGTTTGCA
GTACTAGCAA CAGAGTTTCC TATTGTCTTT GTAAAAAATG CAGAGAGTGG TCAATTTACC
CCTATCGCTA TGATGGGAAT AAAAAATAAC TTCAACCTGT ACTGCCAAAC GAAAAACTGG
GAGGCATCAG TAACGCCAAT AGGCTTTAGC AAGGCACCTT TATCTTTAAT GCAAACCTCT
AAAGAGAGCG ACGAGGTGAT GGTGTTTATC GATGAAGATA GTGAGCTTGT CACCTCAGAT
GAAGGTAATA AGCTTTTTGA TGATTCCGGG GAGCAGACTG AATACTTGAA AAAACGCTCT
AATGCGCTAT TGGATCTCGC TAGCTTTACT CAACAAACAT CCGCCATTAC TCAATACTTT
GCTGAGCTAA ATCTGCTTGC TCCTAAGCAA CTAACAGTCA AACTCAACAG CGATAGCCCA
GAGGTTAATA TTGATGGTGT GTATATCATC GATGAACAAA TCTTGAATGA GCTTAACGAT
GAAGCGTTCC TCACCTTGAA AAGTAAAGGT TTAATGCCGT TAATTTATGC TCACCTAACC
TCACTGCACC AGATAGGTAG ATTGATCACT AAACAAAATC AGCTGGATAA AGCCTAG
|
|---|
| Protein sequence | MTNISPLNSS KHLNTYIKES KDFSRFAAQS LIPIVVQEFA VLATEFPIVF VKNAESGQFT
PIAMMGIKNN FNLYCQTKNW EASVTPIGFS KAPLSLMQTS KESDEVMVFI DEDSELVTSD
EGNKLFDDSG EQTEYLKKRS NALLDLASFT QQTSAITQYF AELNLLAPKQ LTVKLNSDSP
EVNIDGVYII DEQILNELND EAFLTLKSKG LMPLIYAHLT SLHQIGRLIT KQNQLDKA
|
|---|
| |