Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1267 |
Symbol | |
ID | 6115502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1606665 |
End bp | 1606943 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641632750 |
Product | Trp operon repressor |
Protein accession | YP_001759654 |
Protein GI | 170725628 |
COG category | [K] Transcription |
COG ID | [COG2973] Trp operon repressor |
TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.885699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00351193 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAGCTG AGTGGGATTG TGTATTAGAA AAAGTCGTGA GTCATCAAGA TCACAACGCG CTAATTGAGC TATTTGAACT CCTGTTAACT GAAGAGGAGC GAAGTGCTAT TGCGGGCAGA CTAAAAGTGT TTCAGGTGCT ACTTCTTGGT GAGATGAGTC AACGTCAGAT AGCTGCTGAG TATAAGATAA GTATTGCTAC TATCACACGT TGCTCTAACT ATCTAAAACA TATGTCTCCC GAGCAGAGAG AGAAGATTAA AACACTTATC TTAGGTTAA
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Protein sequence | MRAEWDCVLE KVVSHQDHNA LIELFELLLT EEERSAIAGR LKVFQVLLLG EMSQRQIAAE YKISIATITR CSNYLKHMSP EQREKIKTLI LG
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