Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1266 |
Symbol | |
ID | 6115501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1605935 |
End bp | 1606396 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641632749 |
Product | cytochrome c prime |
Protein accession | YP_001759653 |
Protein GI | 170725627 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00355907 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGA ATGCAAAAAT GGCCATCTTG GCAGTTGTTA CCAGTACAGT ACTAGCGACA AGCGTACAGG CAGGTAATTT CAAAAAGACC GATGATGCAA TTGAATACCG TCAATCAGCA TTTAGCTTAC TAGCCTACAA TTTTGGTGAT ATGGGCGCGA TGTTAAAAGG CAAGAAACCG TTTGATGCTG AGGTGTTTGC AATGCGAGCA GACAACGTTG CGGCACTTTC AAAGCTTCCT TTAGAGGGCT TTACACCAGG TTCTGATAAA GGTGACACTG AAGCACTGCC TAAAGTCTGG ACTGAAAAAG CTGATTTTGA TGCCAAGATG CTTCAGCTTC AAAAAGATTC AGCAGCCCTA GCTATTGCAG CAAAAGCTGA CGATAAAAAA GCACTGAAGC AAGCCTTTAT GGCAACAGCT AAAAATTGTA AAGGTTGTCA CGATAGCTAC AAGAAAGACT AA
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Protein sequence | MNKNAKMAIL AVVTSTVLAT SVQAGNFKKT DDAIEYRQSA FSLLAYNFGD MGAMLKGKKP FDAEVFAMRA DNVAALSKLP LEGFTPGSDK GDTEALPKVW TEKADFDAKM LQLQKDSAAL AIAAKADDKK ALKQAFMATA KNCKGCHDSY KKD
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