| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1258 |
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| Symbol | |
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| ID | 6115493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1595246 |
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| End bp | 1596337 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632741 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001759645 |
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| Protein GI | 170725619 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000128084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000776934 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCAAG ATACAATAAA TAATGTTCAT ATCAGTTCAG AAAAAGTACT CGTGACACCT
CAAGAGCTAA AGCTTGAGCT TCCCCTGTCT GAGCCTGCAT ACCACTATGT ATTAAATGCC
CGTAAAACAG TTGCTGATAT CGTCCACAAG CGAGATAACC GCGTACTTAT CGTCACCGGT
CCCTGTTCTA TCCATGATAT CGACTCTGCG AAAGAGTACG CATTAAAGCT TAAGACGCTC
CATGATGAGC TAAAAGATGA CTTCTTTATT TTGATGAGAG TCTACTTCGA GAAGCCAAGA
ACGACCGTAG GCTGGAAGGG GATGATCAAT GATCCTGATA TGGATGAGTC GTTTGATGTT
GAGAAAGGTC TAAGAAAGGC CCGTGAGTTG ATGATCTGGT TGGCTGAGTT AGGTTTACCA
GTGGCCACGG AGGCGCTCGA TCCTATCAGC CCTCAATATA TGTCAGAACT TGTCACTTGG
TCTGCTATTG GTGCAAGAAC CACAGAGTCA CAAACACACA GAGAGATGGC GTCAGGCCTT
TCTATGCCAG TGGGTTTTAA AAATGGCACC GACGGTAAGT TAGGGGTGGC TATCAATGCT
CTGGAGTCTG CTGCCAGTGG GCACAGATTT ATGGGAATTA ACCAGCAAGG GCAGGTGGCA
CTGCTTCAAA CTGCAGGTAA CCCTGATGGC CACGTTATCC TACGCGGTGG TAAGAGCCCT
AACTACGATG CTAAAAGTGT TGAAGATTGT GAGCAGCAAC TGCACAGTGC GAACTTAAAT
GCTCGTTTAA TTGTCGATTG CAGTCACGGC AATTCATCAA AGGATCATAA AAAGCAAAAA
GGGGTCTGCG AAGATGTATT TAAGCAGATT TTATCTGGTA ATCAATCTAT CATTGGTGTG
ATGCTTGAGA GCCACCTTAA TGAGGGGAAT CAAAGCAGTA ATAAGCCGAT GAGTGAGCTG
GCTTATGGCG TCTCTGTCAC GGATGCGTGT ATTGATTGGG CCACGACAGA GGAGCTGTTG
AGAGCTGGAG CCGCATCACT GAGTAGCGTG TTACCTAATC GTTTCGATCA GCGAAAAGTG
GTTAATGGTT AA
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| Protein sequence | MQQDTINNVH ISSEKVLVTP QELKLELPLS EPAYHYVLNA RKTVADIVHK RDNRVLIVTG
PCSIHDIDSA KEYALKLKTL HDELKDDFFI LMRVYFEKPR TTVGWKGMIN DPDMDESFDV
EKGLRKAREL MIWLAELGLP VATEALDPIS PQYMSELVTW SAIGARTTES QTHREMASGL
SMPVGFKNGT DGKLGVAINA LESAASGHRF MGINQQGQVA LLQTAGNPDG HVILRGGKSP
NYDAKSVEDC EQQLHSANLN ARLIVDCSHG NSSKDHKKQK GVCEDVFKQI LSGNQSIIGV
MLESHLNEGN QSSNKPMSEL AYGVSVTDAC IDWATTEELL RAGAASLSSV LPNRFDQRKV
VNG
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