| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1252 |
|---|
| Symbol | |
|---|
| ID | 6115487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 1590311 |
|---|
| End bp | 1591099 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641632735 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_001759639 |
|---|
| Protein GI | 170725613 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000544074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000156209 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATAT TTTCCGCTTC AGCCATGTTT TTTTACTGCA TCGCCTTAGT GCTAGTGGTG
AGCCGTCTGT TTCATAGTGA CGGTCCTAAC CGCCGCCTAG TTGCTGCAGT TGCTGCTATT
GCCGTCGTCT TACACGCAGC AGCGCTTTCA CAAGCTATGT TCACCGGTGA CGGGCAGAAC
TTCAGCCTAA CCAATGTGAT CTCACTGGTT AACTGGATTA TCGCCTTTAG TTTTACAGTG
CTGCTCTTCA GACTCAAGAT GATTGTGGTC GTGCCTGTGG TTTACGCCTG CTCTATCATC
TCTGTCGCCC TACTTTGGTT AGTACCGCCA GAATATATCA CCCATTTTGA GATCCACCCG
GATATCTTAG TGCATGTGGT GCTTTCGCTT ATGGCCTACA GCGCCTTGAT GATCGCGGCA
TTATATGCCA TTCAACTTGC CATCATTCAA AATAAGTTAA AGAGCAAGAA GCTGATTATG
AACCCAGCGA TGCCACCTTT AATGACCGTT GAGAAACAGC TTTACCACCT AGTGATTGTC
GGAGTTATCC TGCTTAGTTT ATCGCTCGCC ACAGGCTTTA TCTTCCTCGA CGATATGTTT
GAAGAGGGCA AAGGCCATAA AGCGGTACTC TCAATCATCG CTTGGTTTAC CTATATTGCC
ATGCTTGCAC AGCAGTATTG GGTGGGCTGT AAAATAAGAA CCGCCGTTAT CTATACCCTT
TCAGGCGCGA CACTATTGTC ACTTGCCTAC TTTGGCGCAC GAATCGTCAA AGAGCTGATT
TTAGGCTAA
|
|---|
| Protein sequence | MVIFSASAMF FYCIALVLVV SRLFHSDGPN RRLVAAVAAI AVVLHAAALS QAMFTGDGQN
FSLTNVISLV NWIIAFSFTV LLFRLKMIVV VPVVYACSII SVALLWLVPP EYITHFEIHP
DILVHVVLSL MAYSALMIAA LYAIQLAIIQ NKLKSKKLIM NPAMPPLMTV EKQLYHLVIV
GVILLSLSLA TGFIFLDDMF EEGKGHKAVL SIIAWFTYIA MLAQQYWVGC KIRTAVIYTL
SGATLLSLAY FGARIVKELI LG
|
|---|
| |