| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1212 |
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| Symbol | |
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| ID | 6115447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1547619 |
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| End bp | 1548815 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632696 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001759600 |
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| Protein GI | 170725574 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.513557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0233716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT TAGACCAAGC ATTAGCAGAA ATTAAACGTG GTACCGATGA GATTTTGCTC
GAAGCGGATC TGCTGGAAAA GTTGAAAGAG GGACGTCCTT TACGTATTAA GCTTGGAGCC
GATCCTACCG CTCCCGATAT TCACCTTGGT CATACGGTTA TCTTAAACAA GATGCGTACT
TTCCAAGAGT TAGGCCACGA AGTTATCTTT CTTATTGGTG ACTTCACTGG CATGGTTGGC
GACCCAAGTG GTAAAAACAG CACTCGTCCT CCGCTAACGC GTGAGCAGGT GCTTGCTAAT
GCTGAGACCT ATAAGCAACA GGTTTATAAG ATCCTTGATC CAGCTAAAAC TCGTATCGAG
TTTAACTCAA GCTGGTTAGA GCCATTAGGT GCGGCAGGCA TGATACGTCT TGCCTCTAAG
CAAACCGTAG CACGTATGAT GGAGCGTGAT GACTTTAAGA AGCGTTACGC TTCTGGTCAG
TCAATTGCTA TCCATGAGTT TATGTACCCA CTACTACAAG GTTACGATTC CGTTGCGCTA
GAAGCTGATG TCGAGCTTGG TGGAACAGAT CAAAAGTTCA ACCTGTTGAT GGGGCGTGAG
CTACAGAAAT CTAAAGGTCA AAAACCTCAA ACCGTGATCA TGATGCCTCT ATTAGAGGGA
TTGGATGGCG TGAAGAAGAT GTCGAAGTCT GCTCACAACT ATATTGGTGT GAGTGAGCCT
GCCGGTGAGA TGTTTGGCAA GATCATGTCT ATCTCTGATG ACCTAATGTG GCGCTACCTT
GAGCTTCTCT CGTTCCGTCC ATTAAGTGAA ATTGAGCAGT TTAAGCGTGA TGTTGAGCAG
GGCACTAACC CTCGTGATAT CAAGATAGCG CTTGCGAAAG AGATTATTGC TCGTTTCCAT
GATGAAGCGG CTGCTGAAGG TGCTCATCAA GAGTTCATTA ACCGTTTTCA GAAGGGAGCA
ATTCCTGATG ATATCGAAGA GCTTGAGATA GCTGTTGGCG AGGGGATTGC GATTGCTAAC
TTGCTTAAAG AAGCTGGCCT TGTGAATTCA ACCTCAGATG GTATGCGTAT GATTAAGCAG
GGCGCGGCTA AAATAGATGG CGCTAAGATT GACGATACTC GTCTGCAGTT AACTGCGGGA
ACGAGCGGAG TATTCCAGGT TGGTAAGCGT AAGTTTGCTA AGATCACTCT AGTATAA
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| Protein sequence | MADLDQALAE IKRGTDEILL EADLLEKLKE GRPLRIKLGA DPTAPDIHLG HTVILNKMRT
FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKQQVYK ILDPAKTRIE
FNSSWLEPLG AAGMIRLASK QTVARMMERD DFKKRYASGQ SIAIHEFMYP LLQGYDSVAL
EADVELGGTD QKFNLLMGRE LQKSKGQKPQ TVIMMPLLEG LDGVKKMSKS AHNYIGVSEP
AGEMFGKIMS ISDDLMWRYL ELLSFRPLSE IEQFKRDVEQ GTNPRDIKIA LAKEIIARFH
DEAAAEGAHQ EFINRFQKGA IPDDIEELEI AVGEGIAIAN LLKEAGLVNS TSDGMRMIKQ
GAAKIDGAKI DDTRLQLTAG TSGVFQVGKR KFAKITLV
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