Gene Swoo_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1181 
Symbol 
ID6115416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1513461 
End bp1513799 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content44% 
IMG OID641632665 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001759569 
Protein GI170725543 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000688194 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGAAACTGA TCACCGCAAT TATAAAGCCT TTTAAATTAG ATGATGTCCG TGAAGCCTTG 
TCTTCATTGG GAGTACAGGG CTTAACAGTC ACAGAAGTCA AAGGGTTCGG ACGCCAAAAA
GGTCACGCTG AACTCTATCG CGGCGCAGAG TATTCTGTAG ATTTCCTGCC AAAAATTAAA
CTAGAGATCG CTATATCCAG TGGCCATGAA GATGAGGTGA TAGAGGCGAT CATCAACGCC
GCCAATACGG GCAAAATAGG TGATGGCAAA ATTTTTGTCT CCCCACTAGA GCAGGTTGTT
CGTATTAGAA CATCAGAAGA AGGCGATGAG GCTATTTAG
 
Protein sequence
MKLITAIIKP FKLDDVREAL SSLGVQGLTV TEVKGFGRQK GHAELYRGAE YSVDFLPKIK 
LEIAISSGHE DEVIEAIINA ANTGKIGDGK IFVSPLEQVV RIRTSEEGDE AI