Gene Swoo_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1176 
Symbol 
ID6115411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1508829 
End bp1509161 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content41% 
IMG OID641632660 
Productcytochrome c class I 
Protein accessionYP_001759564 
Protein GI170725538 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000869093 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGTAA ATAAAAACAA GAAGAGTAAG GCAATAAAAG CCATATCGCT CTCCATTGGT 
TTAGCCGTTA TGGGAAGTAT GAGCGCAGCT TCAGCGGCAG ATGATCAAGC GTTACTGAAT
ATGTGCAAAG CCTGCCATGG AAATGATGGA AGCAGTGAGT TTGCCTCAAC TCCAAATTTA
AAATGGCAAA ACACAGCGTA CATGGTGAAA CAACTAGAGC AGTTTAAAAG TGGTCAACGC
CAAGATAAAA CCATGACTAA GGTCGCCAAA ATACTAAATA AACAGCAGAT GGAAGCACTG
GCAAGCTACT TTAATAAAGG TAAGGAAGAG TAA
 
Protein sequence
MGVNKNKKSK AIKAISLSIG LAVMGSMSAA SAADDQALLN MCKACHGNDG SSEFASTPNL 
KWQNTAYMVK QLEQFKSGQR QDKTMTKVAK ILNKQQMEAL ASYFNKGKEE