Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1159 |
Symbol | |
ID | 6115394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1493128 |
End bp | 1493481 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632643 |
Product | dihydroneopterin aldolase |
Protein accession | YP_001759547 |
Protein GI | 170725521 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1539] Dihydroneopterin aldolase |
TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase [TIGR00526] FolB domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000272925 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0363413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAGGG TATTAATCAG GCAGTTAAAA ATTGAAACCA TTATCGGGAT CTATGAGTGG GAAAAGCAGA TCCACCAGAC TCTATTGGTC GATCTTGATA TGGCTTGGGA TAACAAAATG GCAGCGGCTA CCGATGATTA CCAGCATGCG CTCTGTTATG AAACGGTTTC TAACCGCTTA ACTGCTTTGA TTACGCAGAA GCCTATTGAG CTTATTGAAA CCGTGGCTGA GATGATAGCA AACTGCCTGT TGACTGAGTT TAATGTTCCT TGGGTTAAAG TGACCATTAT GAAGCCCGGG GCGGTTCCAA CAGCTGCGGC TGTGGGTGTA GAGATAGAGC GAGGCCACGC TTAA
|
Protein sequence | MDRVLIRQLK IETIIGIYEW EKQIHQTLLV DLDMAWDNKM AAATDDYQHA LCYETVSNRL TALITQKPIE LIETVAEMIA NCLLTEFNVP WVKVTIMKPG AVPTAAAVGV EIERGHA
|
| |