| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1154 |
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| Symbol | |
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| ID | 6115389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1488122 |
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| End bp | 1489849 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632638 |
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| Product | DNA primase |
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| Protein accession | YP_001759542 |
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| Protein GI | 170725516 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000263916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0506591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAC CTCGTGATTT TATCAATGAG CTAGTAGCTC GAATTGACAT AGTCGATCTA
ATCGACGCAA AAGTACCCCT AAAAAAGGCG GGTAAGAACC ACTCTGCCTG TTGCCCTTTT
CACAGCGAAA AATCCCCCTC TTTTACCGTA AGCCGGGATA AACAGTTCTA CCATTGCTTC
GGTTGTGGTG CACATGGCAA CGTCATTGAT TTCGTCATGG AATATGACAG GCTAGACTTT
ATCGATGCCA TTGAAGATCT CGCTGGACAA CTTGGTGTAG AAGTCCCAAG AGAGAAAGGA
ACAGGGCCAA GACGCGACGA AGGATTAAGT CGTGATCTGT ATCAATTAAT GGAAGAAGCG
AGTCTGTACT TTCAGAATCA GCTTAGACAA AATAATGATA AACAAAAGGT TCTTGATTAT
TTAGCACATC GAGGACTCTC CAATGACGTG GTCGAACACT TCAATATTGG ATTTGCACCC
GACGGCTGGG ACGGTTTACT AAGCCGCTAC CGCCAAAGTC AGGATGCACA AGATAAACTT
CTCACCGCTG GTATGGTGAT AGAGAACGAT AACGGCAAAC GTTACGATAG ATTTAGGGAC
AGATTAATGT TCCCAATTCG TGACAGAAGA GGCCGAGTTA TCGGTTTTGG TGGTCGAGTT
TTAGGCGATG GTACGCCAAA GTACTTGAAT TCTCCAGAAA CGCCCATATT TCATAAGGGC
AATGAACTCT ATGGTCTCTA TGAGCTGAAA CAAAAGCACA GAGATCCGCA AAAAGTGCTC
ATTGTCGAAG GCTATATGGA TGTGGTTGCA CTGGCTCAAT TTGGTGTCGA CTACGCCGTG
GCATCATTAG GTACATCGAC AACCGCTGAT CAATTTCAGC TATTGCTACG TAGTGCCAAA
GAGGTTGTCT GCTGTTATGA CGGCGACAGA GCTGGAACAG AGGCCGCTTG GCGAGCTCTG
GAAACAGCAC TCCCCCTGCT AAAACCAGGT AATCAGGTGA AGTTTATGTT TCTACCTGAA
GGTGAAGACC CTGATACTAT GGTCCGTCAG GTGGGAAAAG AGGTATTTGA AAATCAGATT
GAAGAAGCCA AACTACTGCC CGAGTTTCTA TTTGAAACCT TAGCCGCACA ATATGGCTCA
GACAAAGGCA CGTTAGCTAA ACAGGCAATC AAGCTGATTG AAAAGATTCA AGACACGGTC
TTACAAAGTT TACTGCTAGA GAACCTAGCT TATAAACTGG GTATGAACAG TGCTGAAGAG
CTAAAAAGGA AGCTGGGCTT CTCTAGTAAA GAGCAAGCAA AACCGCTTCA AACAAAAGCA
TTAAAAGGAC GAGGAACCCC ATTGCGATTA GCCATCGCCT TGCTAGTACA AAATCCTCTT
TTAGGTGAAG GTTTGCCAGA GCAACCAGCA CTGAAACACA TAAAGATGGC CGGCATAGAG
TTGCTGACCC TGTTATTAGA CATAACCCGT GTACAGGTAA AAAACAGCGC ACAACTACTT
GAGCAGTTTA GGGGAGATGA GCAACTCAGC ACCCTAAAAA AACTGACCCA ATGGGACCAT
CAAGTGGCGG ATGAAAACCT GCAACTCGAG TTTAGAAAAA CCCTGATCTG GTTGAACAAC
CAATATATTG AACAACGATA TCAGGAATTG AGTCTAAAAC AGAACCATAC TAAAGAAGAA
AGGATACAGC TGACTAAGCT TATCGCTGTC ATAAAAGGGC TGAAATAA
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| Protein sequence | MAIPRDFINE LVARIDIVDL IDAKVPLKKA GKNHSACCPF HSEKSPSFTV SRDKQFYHCF
GCGAHGNVID FVMEYDRLDF IDAIEDLAGQ LGVEVPREKG TGPRRDEGLS RDLYQLMEEA
SLYFQNQLRQ NNDKQKVLDY LAHRGLSNDV VEHFNIGFAP DGWDGLLSRY RQSQDAQDKL
LTAGMVIEND NGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG
NELYGLYELK QKHRDPQKVL IVEGYMDVVA LAQFGVDYAV ASLGTSTTAD QFQLLLRSAK
EVVCCYDGDR AGTEAAWRAL ETALPLLKPG NQVKFMFLPE GEDPDTMVRQ VGKEVFENQI
EEAKLLPEFL FETLAAQYGS DKGTLAKQAI KLIEKIQDTV LQSLLLENLA YKLGMNSAEE
LKRKLGFSSK EQAKPLQTKA LKGRGTPLRL AIALLVQNPL LGEGLPEQPA LKHIKMAGIE
LLTLLLDITR VQVKNSAQLL EQFRGDEQLS TLKKLTQWDH QVADENLQLE FRKTLIWLNN
QYIEQRYQEL SLKQNHTKEE RIQLTKLIAV IKGLK
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