Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1142 |
Symbol | |
ID | 6115376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1467525 |
End bp | 1468247 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632625 |
Product | SapC family protein |
Protein accession | YP_001759530 |
Protein GI | 170725504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC ATGTACTACT TAATAGCCTA GAGCATAAAG ATCTTAAAGT GATAACCGAA CGCTCAAAGG AGCTCGGGGA CAATATGTGG TACAGCGTGA CCTTTCCCGC AGAGTTTCGC AGTATTCAGG CAAGCTACCC TATCTTTTTT CACAAAGATG GCGCTACTGG TCAGTTCTTT TCTGTCGCCC TATTTGGCTT TCAGCACAAT GAGAACCTCT TTTTAAATGA TGAGGGTTGG CAAGCATCCT ACATCCCTTT GTCTGTCAGA CGTCAGCCTT TTCTCATTGG ACAGCAAACA GTACGTGAAG ATGGTATTGA GCAGCAACAA AGGGTAATTC ATGTCGACAT GGAGAGTCCT AGAGTTTCAG ATACCGAAGG GGAAGCTCTA TTTCACCCTT TTGGTGGTAA TACAGATTTT CTCGATGCCG CCGCAGAGAT GCTAGAAACA ATCCACTACG GGCTGCAAGA CAGTCAACGC TTTATCGATA CCTTGATTGA ACATCAGCTG CTTGAGTCAT TCACCTTAGA TATCACCCTC GACAATGGGG AGCAGAAGCA GATGATAGGC TTCTATACCA TCAATGAGGA GATACTGGCT GGCCTTGCGC CTGAAGTGTT AACGCAACTG CATAAGACTG GACACCTACA AGCCATCTAT ATGGCAATGG CATCGCAATC AAAGATCCGC GATCTGTTAA CGTTAAAAAA TGCAAAACAA TAA
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Protein sequence | MSKHVLLNSL EHKDLKVITE RSKELGDNMW YSVTFPAEFR SIQASYPIFF HKDGATGQFF SVALFGFQHN ENLFLNDEGW QASYIPLSVR RQPFLIGQQT VREDGIEQQQ RVIHVDMESP RVSDTEGEAL FHPFGGNTDF LDAAAEMLET IHYGLQDSQR FIDTLIEHQL LESFTLDITL DNGEQKQMIG FYTINEEILA GLAPEVLTQL HKTGHLQAIY MAMASQSKIR DLLTLKNAKQ
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