Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1119 |
Symbol | |
ID | 6115353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1438796 |
End bp | 1439704 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641632602 |
Product | ribokinase |
Protein accession | YP_001759507 |
Protein GI | 170725481 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.970785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAGAA TCGTCATCAT CGGCAGTGCC AATGTGGATC ACGTAATGTC ATTTGACTAC CTGCCAAGTC CCGGCCAAAC CTTACTCAGT CAGCAGTATC GTATTGAGCA TGGTGGCAAA GGCGCTAATC AAGCATTGGC GTGTGCCCGA TTAGCAACAG CCCAAAGCCA GATAGATTTT ATCTGCCACT TAGGCTGTGA TGCCATCGCA GATGAGATGT CAGCCAGCTG GATAAAAGAT GGCATCTCTC CCCAAGGAAT AAGTAAGCTT GCGGGAGAGC AAACAGGCAG CGCCATGATA TTTCTCGGTG AAAAAGGGGC TAATGCTATC GGTGTTGCAC TGGGAGCAAA CGCCAGCTTA ACTCCACAAT CGTTGGAAAA ACACAGATCT TTGATAACCG ATGCTAACTG GCTGCTGATC CAACTCGAGA CACCAACAGC CAGCGTGGCC CATGCCCTTA ACCTGGCGAA AAGTCATGGT ACTCGCACCA TACTCAATCC CGCTCCCGCC GCTACACTGA GTCACGACAT ACTCAGAGCT GTTGATATCA TCACCCCTAA CGAAACCGAA GCTCAGGCGA TTACTGGTAT AGAGGTTAGC GATATCGCCA CAGCAAAGCT TGCCGCCCAG ATGCTGCATC AACTGGGCCC TAGTATTGTG ATTATCACCT TAGGGCAACA GGGGGCTTAT TTAAGCTGCG ATGAGTTTAA AGGCCAGATC ACCGCACCAG CGGTTGATGC CGTAGATACG GTGGCAGCGG GTGATACCTT TAATGGCGCC CTTACTATCG CCTTAAGCGA AGGTGGATCC ATAGTCGAGG CCGTTAAATT TGCCAATAGA GCTGCAGCCA AAGCCGTCAC TAAACCCGGC GCCCAGCGCA GCATCCCCTA TCGTTCTGAG CTAGTTTAG
|
Protein sequence | MSRIVIIGSA NVDHVMSFDY LPSPGQTLLS QQYRIEHGGK GANQALACAR LATAQSQIDF ICHLGCDAIA DEMSASWIKD GISPQGISKL AGEQTGSAMI FLGEKGANAI GVALGANASL TPQSLEKHRS LITDANWLLI QLETPTASVA HALNLAKSHG TRTILNPAPA ATLSHDILRA VDIITPNETE AQAITGIEVS DIATAKLAAQ MLHQLGPSIV IITLGQQGAY LSCDEFKGQI TAPAVDAVDT VAAGDTFNGA LTIALSEGGS IVEAVKFANR AAAKAVTKPG AQRSIPYRSE LV
|
| |