Gene Swoo_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1119 
Symbol 
ID6115353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1438796 
End bp1439704 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content51% 
IMG OID641632602 
Productribokinase 
Protein accessionYP_001759507 
Protein GI170725481 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.970785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGAA TCGTCATCAT CGGCAGTGCC AATGTGGATC ACGTAATGTC ATTTGACTAC 
CTGCCAAGTC CCGGCCAAAC CTTACTCAGT CAGCAGTATC GTATTGAGCA TGGTGGCAAA
GGCGCTAATC AAGCATTGGC GTGTGCCCGA TTAGCAACAG CCCAAAGCCA GATAGATTTT
ATCTGCCACT TAGGCTGTGA TGCCATCGCA GATGAGATGT CAGCCAGCTG GATAAAAGAT
GGCATCTCTC CCCAAGGAAT AAGTAAGCTT GCGGGAGAGC AAACAGGCAG CGCCATGATA
TTTCTCGGTG AAAAAGGGGC TAATGCTATC GGTGTTGCAC TGGGAGCAAA CGCCAGCTTA
ACTCCACAAT CGTTGGAAAA ACACAGATCT TTGATAACCG ATGCTAACTG GCTGCTGATC
CAACTCGAGA CACCAACAGC CAGCGTGGCC CATGCCCTTA ACCTGGCGAA AAGTCATGGT
ACTCGCACCA TACTCAATCC CGCTCCCGCC GCTACACTGA GTCACGACAT ACTCAGAGCT
GTTGATATCA TCACCCCTAA CGAAACCGAA GCTCAGGCGA TTACTGGTAT AGAGGTTAGC
GATATCGCCA CAGCAAAGCT TGCCGCCCAG ATGCTGCATC AACTGGGCCC TAGTATTGTG
ATTATCACCT TAGGGCAACA GGGGGCTTAT TTAAGCTGCG ATGAGTTTAA AGGCCAGATC
ACCGCACCAG CGGTTGATGC CGTAGATACG GTGGCAGCGG GTGATACCTT TAATGGCGCC
CTTACTATCG CCTTAAGCGA AGGTGGATCC ATAGTCGAGG CCGTTAAATT TGCCAATAGA
GCTGCAGCCA AAGCCGTCAC TAAACCCGGC GCCCAGCGCA GCATCCCCTA TCGTTCTGAG
CTAGTTTAG
 
Protein sequence
MSRIVIIGSA NVDHVMSFDY LPSPGQTLLS QQYRIEHGGK GANQALACAR LATAQSQIDF 
ICHLGCDAIA DEMSASWIKD GISPQGISKL AGEQTGSAMI FLGEKGANAI GVALGANASL
TPQSLEKHRS LITDANWLLI QLETPTASVA HALNLAKSHG TRTILNPAPA ATLSHDILRA
VDIITPNETE AQAITGIEVS DIATAKLAAQ MLHQLGPSIV IITLGQQGAY LSCDEFKGQI
TAPAVDAVDT VAAGDTFNGA LTIALSEGGS IVEAVKFANR AAAKAVTKPG AQRSIPYRSE
LV