Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1077 |
Symbol | |
ID | 6115311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1396826 |
End bp | 1397938 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632560 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001759465 |
Protein GI | 170725439 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000191567 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGTAT TTAGATACCT GATTCGTGAA GTTTTAAAGG CACAAATTGC GGTACTTTTC GTGTTATTAG CTATTTTTAT TAGCCAACAC TTTGTTCGTG TACTTGCTAA TGCGTCGGAC GGTGAATTTC CCGCTTCATT AGTGATGACC CTACTTGGAC TCAACCTACC TTACCTTGCA GTTCTGGTAC TTCCTCTTAG TTTTTTCCTT GGTATTTTAA TGGCTCATGG GCGTATGTAC GCCGAAAGTG AGATGGTTAT ATTGCACAGT GTTGGGGTCA GTGAGTGGTA TATCACTCGA GTGACACTAT TGCTTGCAGT GATCAATATG CTGATCACTG GAGTATTAGC CGTTTACGTG ACGCCATGGG CAGAGGAGAG ACAGAATCAG GTTTTAGAGC ACGCTCAATC TGAAGCGGGT TTAGCTGCGA TCACTCAGGG GCGTTTCCAA ACCAGCCCCA ATGGCAGAGC CGTACTCTTT GTTGAGCGTA TCGGTCGTGA CAATGAGTTA GATAAAGTGT TTGTTGCCCA GTTGCCCGAC CCTGAAGCAG AGCAAGGTCA GAGTAATATC GTACTGGCCC AAGGCGGTAA GGTCATCGAA GATGAAACTG GTGGTCAACG CTTACAACTA CGTGATGGTG TGCAGTATCA AGGAACGCCT AAACAGGTCG ACTTCCAAGT GATTGAGTTT GGTGGCTATC AGATGCAGAT AAAGGAGCAG GAGGTGAACG AGCGCCGCCG TAAACTTTCT GCCTTGCCAA TTGAAGAGTT AATGAAGCAG GAGGGGCCAG AGAGCAAGGC TGAGTTCCAT TGGCGACTAG CTATCCCTCT ATCTATTCCC TTGCTGACTC TCATCGCAGT GCCTATGGCT AGAGTCAATG TTCGTCAGGG TAAATTTGCT AAGATGTTCC CTGCTATTTT GCTCTATCTT GGTTACTTTG GGTTGATGAT CGCGGGAAGA AAAGCACTGG AGGACGGTAT CATTCCTGGG TATTTAGGCA TGTGGTGGAT CCACCTCTCG GCACTTATCT TAGGGGGATT ACTCTTAGGT AAAGAGCGGC CATCCGGCGT TAAAATCACC GGCTTATTTA AGCGTAAGCA GGTGACATCA TGA
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Protein sequence | MIVFRYLIRE VLKAQIAVLF VLLAIFISQH FVRVLANASD GEFPASLVMT LLGLNLPYLA VLVLPLSFFL GILMAHGRMY AESEMVILHS VGVSEWYITR VTLLLAVINM LITGVLAVYV TPWAEERQNQ VLEHAQSEAG LAAITQGRFQ TSPNGRAVLF VERIGRDNEL DKVFVAQLPD PEAEQGQSNI VLAQGGKVIE DETGGQRLQL RDGVQYQGTP KQVDFQVIEF GGYQMQIKEQ EVNERRRKLS ALPIEELMKQ EGPESKAEFH WRLAIPLSIP LLTLIAVPMA RVNVRQGKFA KMFPAILLYL GYFGLMIAGR KALEDGIIPG YLGMWWIHLS ALILGGLLLG KERPSGVKIT GLFKRKQVTS
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