Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1032 |
Symbol | |
ID | 6115266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1342210 |
End bp | 1343088 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641632515 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_001759420 |
Protein GI | 170725394 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000317103 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.951238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGC TAAAACTGCT CTTCCTCAGC GCTATTTTTA TCCCCTTCCT CTCCTGGGGT GATATAGACG TACCCTGTGA AAATGATCTT GAATGCATTG AGGTTGGTCA ATGGGATCTT GGTATTGCAT TTGGTTATGG CGAGCGCAGC AATCCCCTGA AAGATTACTC TGACATACCT ATCTATTTAG TGCCGACCTT TGCTTATTAC GGTGATAGCT GGTTTTTCGA TAATGGAAAT ATAGGGTACA CCTTAGTGGA AGAGGAGAGG TATACACTGA ACCTTTCCAC CAGTTTCAGT ACCGACAGCG CTTACTTTCA ACGTTGGGAT CCGTCGAATA TATTTCTAGC TGGCTCCAAT AAGTTTGAAG CTAACTCAAT CGCAGCAAAT GGGCGAACTC TCCTCATGAG TGATGAGCCT GAGCCCGACG TCGGCCCTCT AGAGAAACGT AGGTTTACTT ACTTAGGTGG CCTTGATGCA TTTATCTATA CTCGAGCGGG TATCATCAAC TTATCAGTCG CCCACGATAT GCTAAATGTG CACCAGGGCA CCGAAGCCAG ATTAAAATGG CTCTATAATT TTCCTGTTCA AAATTGGAAC TTCGAATTTG CACTGAGATT AGACTGGAAA AGTGAAGAGG TCGTAGATTA CTATTACGGC GTTAGAGAGA GTGAGAGTCC CTATTGGAAT CAAGCTTACC AAGCTAAATC AGCATTAAAT GTAGGGATTG AATTGACTAC CCATTACGTC ATGACTCAGC ACTGGGATCT CATATTTTTA GCCCGATACA CTCAAATTGC CGATGAAATA GCCAATAGTC CGCTACTAGA TCAAGACCAT ACCAGTACTT TTTATCTTGG TACAAGTTAT AGGTTTTAA
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Protein sequence | MNRLKLLFLS AIFIPFLSWG DIDVPCENDL ECIEVGQWDL GIAFGYGERS NPLKDYSDIP IYLVPTFAYY GDSWFFDNGN IGYTLVEEER YTLNLSTSFS TDSAYFQRWD PSNIFLAGSN KFEANSIAAN GRTLLMSDEP EPDVGPLEKR RFTYLGGLDA FIYTRAGIIN LSVAHDMLNV HQGTEARLKW LYNFPVQNWN FEFALRLDWK SEEVVDYYYG VRESESPYWN QAYQAKSALN VGIELTTHYV MTQHWDLIFL ARYTQIADEI ANSPLLDQDH TSTFYLGTSY RF
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