Gene Swoo_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1028 
Symbol 
ID6115262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1339449 
End bp1339760 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content42% 
IMG OID641632511 
Producthypothetical protein 
Protein accessionYP_001759416 
Protein GI170725390 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000119763 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.108496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT TAGAGTTTTT TGAAATTCAG AGCCCCTGTA TCGGTGTATG TCAAACTGAC 
GCTCGAGGTT ATTGCAAAGG ATGTTTACGT AATCGGGATG AGCGTTTTAA TTGGCTGGAG
TTTTCAGATG CGAAAAAATA CGATGTGATT CGTCTCTGTA AGCAGAGAAA ACGTCGTCGC
CAACTGGCAA TTTTGAAGGC GAGAAAAGCC CAGTTATTGC AGGAACGTGC GGATCTCAAT
CCTTCTTTTG ATTTTGAAGC AAGCGATCCA GAAGAGCCTA GTTTATCGAA TGATGACTTT
ACTCTCGAAT AA
 
Protein sequence
MEQLEFFEIQ SPCIGVCQTD ARGYCKGCLR NRDERFNWLE FSDAKKYDVI RLCKQRKRRR 
QLAILKARKA QLLQERADLN PSFDFEASDP EEPSLSNDDF TLE