| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1005 |
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| Symbol | rpmA |
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| ID | 6115239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1316266 |
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| End bp | 1316520 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632488 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001759393 |
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| Protein GI | 170725367 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000876711 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000356458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GCGATTCAGA AAGCAAACGT
CTTGGTGTAA AGCGTTTTGG TGGTGAATCA GTTCTTGCTG GTAACATCAT CGTTCGTCAA
CGTGGTACTA AATTCCACGC TGGTGTAAAC GTAGGTGTTG GTCGTGACCA CACTCTATTC
GCTTTGACTG ACGGTAAAGT TAAGTTCGAA GTTAAAGGTC CTAATAACCG TAAGTTTATT
AGCATCGAAG GCTAA
|
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| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGVGRDHTLF
ALTDGKVKFE VKGPNNRKFI SIEG
|
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