| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0986 |
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| Symbol | |
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| ID | 6115220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1298011 |
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| End bp | 1299069 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632469 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001759374 |
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| Protein GI | 170725348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0225511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTATA AAAATGATGA TGTACGAATA AATAAGATCA AAGAGCTATT GCCTCCCATT
GCGATTCTGG AACGATTTCC GGCAACCGAG AACGCGTCGG CAACGGTTTT TAATGCACGT
GACAATATAC ATCACATTCT TAGAAAAAAT GATGATCGCT TACTGGTCGT TGTCGGCCCT
TGTTCGATTC ATGACCCAGT GGCGGCACTT GAGTATGGGC GGAAACTGGT CAAGCTTAGA
GAGCAGTATA AAGATCAGCT TGAGATAGTG ATGCGAGTTT ACTTTGAGAA GCCTCGTACA
ACCGTAGGTT GGAAAGGTTT GATTAACGAT CCTGATATGG ATAACAGTTT CAAACTCAAT
GATGGTTTAC GAACTGCACG TAAGTTGCTG CTGGATCTGA ATGACATGGG GATGCCAACA
GCTGGCGAGT TTCTTGATAT GATCACCCCT CAATATGTGG CTGATCTTAT GTGTTGGGGA
GCGATTGGTG CTAGGACAAC AGAGTCTCAA GTGCACCGCG AGTTAGCATC GGGTCTATCT
AGTCCTGTTG GCTTTAAAAA TGGTACTGAT GGCACAATTA AAGTTGCTAT AGATGCAATT
GGAGCTGCCA GTGCACCTCA TCACTTTCTT TCTGTGACCA AGTTTGGCCA TTCAGCCATT
GTTGAGACTA AAGGAAACGC TGATTGCCAT ATCATTCTTC GTGGTGGCAA AGAGCCTAAC
TACAGCGCTG AGCATGTGAG TGAAATTAAG CAGCAGCTTG ATAAAGCAGG TCTGGATCTC
AATATCATGA TCGATTTCAG CCATGCTAAT AGTGCCAAGC AGTTTAAACG TCAGCTATTG
GTGGGCGAAG ATGTTGCGGG TCAATTAAGC AAAGGTGACA AAGCCATCTT TGGTGTGATG
ATTGAAAGTA ATCTTATTGA GGGGCGTCAG GATTATATTC CAGGCGAGCC TTTATGTTAT
GGACAGAGTA TTACCGATGC CTGTATCGGA TGGAATGATA CTGAATCTCT GCTTGAGACA
CTAAATCAAA GTGTCAAAGT TAGACGCGAT AATATATAA
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| Protein sequence | MYYKNDDVRI NKIKELLPPI AILERFPATE NASATVFNAR DNIHHILRKN DDRLLVVVGP
CSIHDPVAAL EYGRKLVKLR EQYKDQLEIV MRVYFEKPRT TVGWKGLIND PDMDNSFKLN
DGLRTARKLL LDLNDMGMPT AGEFLDMITP QYVADLMCWG AIGARTTESQ VHRELASGLS
SPVGFKNGTD GTIKVAIDAI GAASAPHHFL SVTKFGHSAI VETKGNADCH IILRGGKEPN
YSAEHVSEIK QQLDKAGLDL NIMIDFSHAN SAKQFKRQLL VGEDVAGQLS KGDKAIFGVM
IESNLIEGRQ DYIPGEPLCY GQSITDACIG WNDTESLLET LNQSVKVRRD NI
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