| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0972 |
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| Symbol | nrfA |
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| ID | 6115206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1284148 |
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| End bp | 1285548 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632455 |
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| Product | cytochrome c552 |
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| Protein accession | YP_001759360 |
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| Protein GI | 170725334 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | [TIGR03152] formate-dependent cytochrome c nitrite reductase, c552 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAGAA TATTAACTAA AAAATCCTTT GCACTGAGTG CATTGGTCGC AGCAAGCCTA
ATGGCTTCTG GTGCGATGGC AAGTGATAAA ACTGAGCCAC GTAATGAGCA ATATAAAGAT
AAGTTCTCTA AGCAATACAA TAGCTGGCAT GAGACTTCAG AAAGTGTAGA GATCACCGAC
GCACTTGAGC AAGATCCTAA CCTAGTTATT CTTTGGGCCG GTTACGGTTT TGCTAAAGAC
TATAACAAGG CTCGTGGTCA TATGTATGCG GTGACTGATT TACGCAATAC ACTGCGTACA
GGTGCACCTA AGAAAGATAC CGATGGGCCT ATGCCTATGG CGTGTTGGTC TTGTAAAAGT
CCAGATGTAC CTCGCATGAT CGAAGAGCAA GGTGAAGATG GTTACTTCTC TGGAAAGTGG
TACAAAGGCG GAGCAGAGAT CGTCAACACT ATCGGTTGTA GTGATTGTCA CGAAAAAGGT
AAGTCTAAGC TACGTATCTC TCGTCCATTC GCAGAGCGCG GCATGGAAGC GATTGGTACA
CCATTTGATA AAGCATCTCG TAAAGATAAG CAGTCTATGG TGTGTGGCCA GTGTCACGTA
GAGTACTACT TCGAGAAGAC TGCCGATAAG AAAGGTTTTG TTAAGTTCCC ATGGGACAAG
GGCACCACTG TTGAAGATAT GGAAGCATAC TATGATGCTA TCGATTTCGC AGACTGGACT
CACAAAGTCT CTAAAACACC AATGTTGAAA GCTCAACACC CAGGCTATGA AACTTGGCAG
CTAGGTATGC ACGGTAAGAA CAACGTAAGC TGTACTGACT GTCACATGCC TAAGGTTAAG
AACGCTGAAG GTCGTAAGTT CACCGATCAT AAAGTGGGTA ACCCATTCGA TCGTTTCGAA
GAGACCTGTG GTAATTGTCA TGATCAAAGC AAAGAGTTCA TGGTTAACCT AGATAAAGAG
CGTAAAGCTA AGGTGAAAGA GATTCAGCTT AGAGCTGAAA ACCAGCTAGT TAAGGCACAC
TTCGAAGCAG GCGCTGCTTG GAAAGCGGGT GCTACCGAAG CTGAAATGAA GCCTATCCTA
ACCGATATCC GTCATGCTCA ATGGCGCTGG GATTATGCAA TCGCCTCTCA CGGTGTTGCC
TCTCACGCTC CTGATGAAGC ACTACGTGTA CTAGGTACAG CGGTAGATAA AGCGGCTGAT
GCTCGCGTTA AGCTAGCTCA ACTACTTGCT AAGAAAGGTG TACCACAGCC AATCGCTCTT
CCAGATATCT CTACTAAAGC GAAAGCACAA GCGGCTCTAG GTATGGATAT GAAGAAGATG
AATGCTGATA AGGAAGAGTT CAAGAAGACT GTACTTCCTA AGTGGGATGC TGAAGCTAAA
AAGCGTGAAG CAACTTACTA A
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| Protein sequence | MVRILTKKSF ALSALVAASL MASGAMASDK TEPRNEQYKD KFSKQYNSWH ETSESVEITD
ALEQDPNLVI LWAGYGFAKD YNKARGHMYA VTDLRNTLRT GAPKKDTDGP MPMACWSCKS
PDVPRMIEEQ GEDGYFSGKW YKGGAEIVNT IGCSDCHEKG KSKLRISRPF AERGMEAIGT
PFDKASRKDK QSMVCGQCHV EYYFEKTADK KGFVKFPWDK GTTVEDMEAY YDAIDFADWT
HKVSKTPMLK AQHPGYETWQ LGMHGKNNVS CTDCHMPKVK NAEGRKFTDH KVGNPFDRFE
ETCGNCHDQS KEFMVNLDKE RKAKVKEIQL RAENQLVKAH FEAGAAWKAG ATEAEMKPIL
TDIRHAQWRW DYAIASHGVA SHAPDEALRV LGTAVDKAAD ARVKLAQLLA KKGVPQPIAL
PDISTKAKAQ AALGMDMKKM NADKEEFKKT VLPKWDAEAK KREATY
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