Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0915 |
Symbol | |
ID | 6115149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1219153 |
End bp | 1221147 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641632398 |
Product | hypothetical protein |
Protein accession | YP_001759303 |
Protein GI | 170725277 |
COG category | [S] Function unknown |
COG ID | [COG3930] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02421] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.699671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACGT TATCTGAGAA GGAGTGTATT GCACTCATTA ACAGGGGCGA GTGTTTTCAA GCTGAGGTTG AAGATGGCGC TTTCATTGTA AAAATTGATG ATTACTCACC TATGGTCTGT ACTGCTATTC ATAATGGCCA CAGATTGCGA GATGATCTTA AAAAATCCTT TTTACTGAGT AAAGAGGAGC GATTTTATGA GGAAGATCCC TATACGGATG AGTTGATCTC CTCATTTCCG ATTGTCTTGA TTGGTAATGA TTCTCGCTTT GAATATGACT TGAATCGGGC TAAAACTTTG TCGACTTACT ATAAAACAGC TTGGAATAAG CAGGTTTGGG AAAAGCCGCT GTCGACTAAA CAAAGAGCCT TTAGTCATGC TAAGCATGAG TCATTCTACA ATGTACTTGA AGCCATCATT GCTCGATTAG AGATGCTATT TAAAAATAGC ATCGTCTTTG ACATGCACTC TTATAATCAT CAAAGGATCG CGAAAGACAC GCCAACGTTT AATATTGGTT CAGGTCAGAT TGATGTCGAG CGTTGGGGGA GCATCAGTCA CTATTTTGAG CGAGAGCTGA ATAAGATAGC CCTGCCAAAT CTCGATGTGA GGGCGGCCAC AGATGAGGTC TTTCAGGGGC GAGGCTACCT TATCGCTCAC ATTAACGCTC ACTTTGACAA CACCTTAGTG TTACCGGTTG AGGTTAAAAA AGTCTTTATG GATGAGACGA GTGGGGAGGT TTATCCTCTG GTACTCGAAG AGCTAAAAGC TGGCGTGAAA CACGCTATCT CTGAAACAGC GGCTCACTTT ATGCGCCGTT TTGGAAAACG CAAAACCGTT AGTAATGCCG AACTACTCTC ATCATCTCTG TCACCGGAGC TGGTTGAACT AGACAAGCAG CTCTATGGAC TGTGTAGAAG CGTTGAGACA CTCAGGTTTA TTAATCCAGT AAATATTGCC AGTGAGCGCA AGAATTTTTT TGGTAAAAAA GCCTTAATTA CGCCTGATTT TAGTTATAAA CAGTTGAATA TTAATCCTTA CCAATTTAGA GAGCAGTTGT ATAAACTCCC TGTCGAACAG GTGATGGACG CTGATATTCA ACAACTATAT CGCCATGTTA TCGATAATAT GGCAACTAAA ATAGACCTGA TATCTTCCAT TGGCAGTGAT GATTTTGTTT ACAACTCGCT GAAATATTAT GGTCAGCCTG ACAAGAACGA TCTGGCTAAT GCTGAGTTTA TTTTAAGGGC GCCTGAAATC GAAGGCGATG ATGAACCCGA ACTTCATTCA GCCGATGTAG CAGTTGAGTT ATTTAAAGAA AAAGCCAAGG AGTGGGGCCT TAAATGCAAG ATTGAGAAGT CATCTCGAAT TGTTGCCAAG GCGATGGTCG ATAATGATAA AGCCTGCTTA TTGATCAATA AAGAGGCCTC ATTTACATCC AAGGAGTTAG TTGCATTTGC TTACCACGAG TTAGGTGTGC ATATGTTGAC AACTGTGAAT GCTAAGCGTC AGAAACTGAA AGTATTTTCT CTAGGTTTGA GCGGCAATAC CCAGACTCAA GAGGGGCTTG CCATCTACAG CGAATATTGC TCTGGCAATT TAACACTAAG CCGATTGAAA ACCTTAGCGC TTAGGGTGGT TGCCGTTAAT TTAATGCTGC AGCACAGAGA TTTCCCTGTG ACTTATCAGG CATTGGTTAA GGATTACGGT GTAAGCTGTG AGCAAGCGTT TACTCTGACA ACTCGTGTGT ATCGTGGTGG TGGTTTTACT AAAGATTACT TATACCTGAA AGGGTTTAGA GATATCTATA CTTTAGGCAA AACGACTAAG CTTGATAATC TATTAGTGGG CAAAACAGGC TTGTTAGACC TGCCTACAGT TAATGAGATG GTGGGGCGAA ACTTGTTGGT AAAACCTGTT TCATTGTTTG AGTTGCAATT AAAGCCGCCT CAACCACTCT CGATTATCGA TTATCTGGTT TCAGGTATCC GTTAA
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Protein sequence | MLTLSEKECI ALINRGECFQ AEVEDGAFIV KIDDYSPMVC TAIHNGHRLR DDLKKSFLLS KEERFYEEDP YTDELISSFP IVLIGNDSRF EYDLNRAKTL STYYKTAWNK QVWEKPLSTK QRAFSHAKHE SFYNVLEAII ARLEMLFKNS IVFDMHSYNH QRIAKDTPTF NIGSGQIDVE RWGSISHYFE RELNKIALPN LDVRAATDEV FQGRGYLIAH INAHFDNTLV LPVEVKKVFM DETSGEVYPL VLEELKAGVK HAISETAAHF MRRFGKRKTV SNAELLSSSL SPELVELDKQ LYGLCRSVET LRFINPVNIA SERKNFFGKK ALITPDFSYK QLNINPYQFR EQLYKLPVEQ VMDADIQQLY RHVIDNMATK IDLISSIGSD DFVYNSLKYY GQPDKNDLAN AEFILRAPEI EGDDEPELHS ADVAVELFKE KAKEWGLKCK IEKSSRIVAK AMVDNDKACL LINKEASFTS KELVAFAYHE LGVHMLTTVN AKRQKLKVFS LGLSGNTQTQ EGLAIYSEYC SGNLTLSRLK TLALRVVAVN LMLQHRDFPV TYQALVKDYG VSCEQAFTLT TRVYRGGGFT KDYLYLKGFR DIYTLGKTTK LDNLLVGKTG LLDLPTVNEM VGRNLLVKPV SLFELQLKPP QPLSIIDYLV SGIR
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