Gene Swoo_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0861 
Symbol 
ID6115095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1153311 
End bp1154315 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content49% 
IMG OID641632345 
ProductMarR family transcriptional regulator 
Protein accessionYP_001759250 
Protein GI170725224 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTCG CATCAAAAAC CTTAACAGAG GGCATAAGAT TGACATCGTT TAGTAATAGT 
GTGACAGATT TGGATAGTGA GCCTTGCCCT AGAGTTAGAG CAAGGGCAGG ATTAAGAGCA
GTCTCACGCC ACATTGTCAG ACAACTAGGC ATGCTCAACT CCGCCTTTGG CGAACTGCCA
CTCTCGCCAG TTCAGGCCCA TGCACTCATT GAGCTCAGTA ACGAAGCGGT GTCCATCAAG
CAACTGGCCC AGCGGCTCAA TATCGATAAA TCCAATGCCA GCCGCGCTGT CACCCATCTC
ACAGAAAAAG GGTTTGCCTA CACGCAATGT AACCCTAAAG ATACTCGAAG CCTGCTGGCC
CATTTAACGC CTCAAGGGAA GAAACTACTG CAAAAGCTCC ATCAACAACA AAACACCATG
TTCGACCAGA TCCTATCTCA ACTCTCAACC GAAGAGGCGA CCACTATCGA GTCAGCCATG
GCCACGTACA ATAAAGCCAT CAGCCGCACT CAAGCCCAAC AAGGCTATAC CATCAGAGAG
GTAACACATG AGGATGATCT GGCTATCGCC AAGCTGATAA GAGAGGTATC GGCAGAGTAT
GGACTCAGCG CCGATAAAGG CTTTAGCGTC GCCGATCCCA GCTTAGATAA CACCAGCGAG
CAGTATCAAG CTACAGGCGC ATGTTACTGG GTTATCGAAC TCGACGGTGA ACTGCTCGGT
GGCGTAGGTA TCGCCCCATT AAGTGGCGAA AAGGGAGTGT GTGAACTGCA GAAGATGTAC
TTTAGCAAAC AGCTCAGAGG CAAAGGATTT GCAAAGCGTA TGGCTTATCT GGCGCTGGAT
TACGCTTGCG AACAGAAATA CCAAACCTGT TACCTTGAAA CCACCGCCTG CCTTACTGAA
GCTATCTCAT TGTATGAATC CCTCGGTTTT GAGCACATCT CACAACATTT AGGTGATACA
GGACATGATG CCTGCGAAAT GCCGATGCTG TTAGCACTTA AATAA
 
Protein sequence
MLVASKTLTE GIRLTSFSNS VTDLDSEPCP RVRARAGLRA VSRHIVRQLG MLNSAFGELP 
LSPVQAHALI ELSNEAVSIK QLAQRLNIDK SNASRAVTHL TEKGFAYTQC NPKDTRSLLA
HLTPQGKKLL QKLHQQQNTM FDQILSQLST EEATTIESAM ATYNKAISRT QAQQGYTIRE
VTHEDDLAIA KLIREVSAEY GLSADKGFSV ADPSLDNTSE QYQATGACYW VIELDGELLG
GVGIAPLSGE KGVCELQKMY FSKQLRGKGF AKRMAYLALD YACEQKYQTC YLETTACLTE
AISLYESLGF EHISQHLGDT GHDACEMPML LALK