| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0852 |
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| Symbol | |
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| ID | 6115086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1143285 |
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| End bp | 1144439 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632337 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001759242 |
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| Protein GI | 170725216 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAACCT TAACTCATAG CAGTAAATTA CCGCACCTTG GCACTAGTAT TTTTACCACT
ATGACTGGGC TAGCCAATGA GTACAATGCC ATTAACCTCT CTCAAGGCTT CCCTGAATTT
GACGCTCCAG AACGGTTAAA ACAAGGCTTA GCCAAATACT GCAATCAAGG CTTTAATCAG
TATGCGCCCT CAAGTGGGAT CGCGCCTCTT CAAGCTCAAA TAGCCGCTCT CACAGAGCGA
ACATATGGCA CGAATATCAA TCCACTCGAC ACAGTTACAG TAACATCTGG TGCGACTGAA
GCACTGTTTG TCGCCATACA AACCATTACC CATCCTGGCG ATGAGATTAT CATCTTCGAC
CCAGCTTATG ACTCCTATAA ACCAGCGATT GAATTGGCTG GAGGCCATGC GGTACATATC
GCCATGCAGG CTCCTGATTA TGCCATCGAC TGGCAGCACG TCGCAGCAGC GATAACAGAT
AGAACCCGCG GGATCATTAT TAATACGCCC CATAACCCCA GCGCAAAAAC CTTAAAACAG
GCTGAGTTTG ATGAATTAAA AAAGCTGGTG AGCAAACACC AATTATTGCT GATAAGTGAT
GAAGTCTACG AGCATATCGC CTTTGAAGGC ACACCACATA TCAGCGTATT AAGCGATCCT
GAGCTTTTCT CCCGCGCTTT TGTTATCGCC AGCTTTGGTA AAACCTTCCA CTGTACAGGT
TGGAAGATGG GTTACTGCAT CGCGCCCGAG GCACTGACGC AAGAGTTTAG AAAAATTCAC
CAATATGTCA CCTTTTCAAG CTTCACTCCT GCGCAACTGG CATTAACCGA TATGCTGGCC
GAAGAGAGTG AACATATCAC CGCACTCGCC CCCTTTTATC AGCACAAGCG AGATCTGCTA
GTGAGTGCCC TACAAGAAAG CCGCTTTACT ATTCTCCCCA GCGAAGGCAC CTACTTTTTA
CTACTCGATT ATTCAGAGAT CTCGCCGCTA GATGACATGG CATTTTGTGA GTATCTGATT
AAAGAGGTGG GCGTAGCCGC CATTCCTTTG AGCGTGTTTT ACCAAAGCGC TCCCAATGAT
AAAGTCATCC GCTTATGCTT CGCCAAAGAG GATGATACCT TGCTACAAGC AGCCCAGATG
TTAACAACTC TCTAG
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| Protein sequence | MKTLTHSSKL PHLGTSIFTT MTGLANEYNA INLSQGFPEF DAPERLKQGL AKYCNQGFNQ
YAPSSGIAPL QAQIAALTER TYGTNINPLD TVTVTSGATE ALFVAIQTIT HPGDEIIIFD
PAYDSYKPAI ELAGGHAVHI AMQAPDYAID WQHVAAAITD RTRGIIINTP HNPSAKTLKQ
AEFDELKKLV SKHQLLLISD EVYEHIAFEG TPHISVLSDP ELFSRAFVIA SFGKTFHCTG
WKMGYCIAPE ALTQEFRKIH QYVTFSSFTP AQLALTDMLA EESEHITALA PFYQHKRDLL
VSALQESRFT ILPSEGTYFL LLDYSEISPL DDMAFCEYLI KEVGVAAIPL SVFYQSAPND
KVIRLCFAKE DDTLLQAAQM LTTL
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