| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0799 |
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| Symbol | |
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| ID | 6115033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1081765 |
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| End bp | 1083381 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632284 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001759189 |
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| Protein GI | 170725163 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0186826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTC TCTCTAAATA TATCCTGCTG ATCGCAGCTT GCTTTGTTGG AATTGGCTTC
TCTGCTTATA TGGGATTTAG TCTATATGAG AAGGAGAGCA AGGTGATTGA GCAGGACTTT
AGAAAGGATG TCGATGATAA AGCCGCTGCA TTAGAAAGAG AGATCTTGCT TAATATTGAG
GTGCTCTACG CAATTAAAGG TTTGTTTGAT AGTTCAAGTG AGGTCACCTC TCAAGAGTTT
AGTCGTATTG CCCGTAGTTT TTTAGTGCGT CACCACGATA TCCAAGCGTT AGAGTGGGTG
CCTAAAGTGA CCTCTGATCA AAGAGAGGCT TTTGAAGCCG CTCAACGTAG GGAGAGTCCT
GGATTTGAGA TCATTGAATC AGAAGTCGAA GGTATGATCT CTGCAAGCCA AAGAGAGAGT
TATTTCCCTG TCTCCTATGT GGCACCTTTT ATCGGTAATG AGCAGATCTT GGGCTACGAT
CTCGCTTCAA ACGAGGAGAG GTTATGGATA ATGGAGAGGG CGACCGATCT CGATAAGCCT
CTGTCTACCT CAGGTGTTAG TTTAAGCTCT TACCAATCAA AACAGCGTGG TTTTATTATC
TTTTTACCCA CTTACCATGG TGAGCCAAGC ACTCTGTTTA AACGTCGGGA GCAGCTAAGG
GGGTTCGTTG TTGGTGTGTA CCGCATCGAT GATATGTTTG GCAGTGCAAT TAAGCGTACC
TCGGTTCAAG GCCTCTACTT CTCCTTAGAG GATAACACCT ATGAAACTGT CTCTAACCTC
TATTCAAACT TTCCTGAAGG TGGAACGACA TTACTGTCAC AAACGGCGTT TATCTATAAG
AAATCGTTAA CGGCATTCAG TGGGCGACAG TGGTCTATCA CCGCGGTGCC CAGTGCAGGT
TACGTGGCAG AGAGACGAGG CCGTCTACCC TATATTATTG CTATATTAGG CAGTTTATTA
GTTCTGTTGG GTGCGCTCTA TATTTATGCC TTGATGAGAC GTTCTGCACT GATTGAGAGG
GAAGTTAAGC AGAGAACTCA TGATCTCAAT GAGGCTAAGC AGAAGCTTGA AGCCCTGTCT
CAAACCGATA GTCTAACGAA AATCTCCAAT CGCCGCTGTT TTGATGAGAG CCTACAAGCA
TGTTGGCAAC ACGCTATTCG TGAGAAATCG AGCATAGGTT TAATCATGAT AGATATTGAT
CATTTTAAGT TGTACAACGA TACCTATGGT CATCTTGCGG GCGATCAATG TTTACGAGAG
GTTGCGAGTG CCCTTAATCA GACACTGAAT CGAAAAACGG ATCTTGTGGC TCGCTACGGT
GGCGAGGAGT TTGTGGTGCT ATTGCCCCAT ACTCGAGATT GCATCTCTCC GGCTAAACGA
TGCCAAATTA ACATTGAGCA ACTGGCTCTG CCCCATGAGA GCTCACCCAC CAGTGAGTAT
GTCACTGTGA GTGTGGGCGT CACAAGTATC TGCCCAGATA AGTGCTCTGA TATGCAAGCT
TTTACAGCTG AGGCAGATAG AGCTCTTTAT CAGGCTAAAA AGTCTGGCCG TAATCGAGTT
CAAGTGTTTG AACACGAGCG CACAGAGCAG GCAGTCGCTG TTGTTAACCA AGCTTAA
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| Protein sequence | MNFLSKYILL IAACFVGIGF SAYMGFSLYE KESKVIEQDF RKDVDDKAAA LEREILLNIE
VLYAIKGLFD SSSEVTSQEF SRIARSFLVR HHDIQALEWV PKVTSDQREA FEAAQRRESP
GFEIIESEVE GMISASQRES YFPVSYVAPF IGNEQILGYD LASNEERLWI MERATDLDKP
LSTSGVSLSS YQSKQRGFII FLPTYHGEPS TLFKRREQLR GFVVGVYRID DMFGSAIKRT
SVQGLYFSLE DNTYETVSNL YSNFPEGGTT LLSQTAFIYK KSLTAFSGRQ WSITAVPSAG
YVAERRGRLP YIIAILGSLL VLLGALYIYA LMRRSALIER EVKQRTHDLN EAKQKLEALS
QTDSLTKISN RRCFDESLQA CWQHAIREKS SIGLIMIDID HFKLYNDTYG HLAGDQCLRE
VASALNQTLN RKTDLVARYG GEEFVVLLPH TRDCISPAKR CQINIEQLAL PHESSPTSEY
VTVSVGVTSI CPDKCSDMQA FTAEADRALY QAKKSGRNRV QVFEHERTEQ AVAVVNQA
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