Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0785 |
Symbol | |
ID | 6115019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1064971 |
End bp | 1066428 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641632270 |
Product | peptidase S41 |
Protein accession | YP_001759175 |
Protein GI | 170725149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000105826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTA GCTTTAAAGA TGTAGTGAAT GTATTTGGCA TCTGCTTGCT GCTCAGTATC CTGCAGCTCT CTCGTTTTTT GGTGATTGAT AACACAACAA AAATGAGTCT AAATCCCCAG CAGATGCAAC AAGATCTCGA CACCTTAGTG GCAGAGGTCA GCCAGCATTC GACTTTTTCA GCCCTTGACC CACTACTTCT GCAGAGTATT GAAAATCGAG TTGACTCTCT TCGCTACCTC TACTCACTAG GCATAGATTC AAGTCGATTT CACGCAGAAA TAGCAAAGCT GCTTGCTCAA CTCAATGACC CAGGTATCAA GCTCTCTTCA AGCACTTACT CCACAGGCCA ACTGCCTTTT TCATTAAAGC CCATGGGACA ACTTTGGCTT GCACTAGATG ACTCCGAAAC GCCTCTCGAC CTTGAGCATC CCTTTATCAG CCATATTGAT GGTGTTGCTC TAACTTATTG GCTCAAAACA GCCAGAAAAT TTATCTCCAG CTCTCAGCAA GAAGATCTGG CACTCACCTT AACATGGCTT TCACGTTTAG ATCTTTTAAG GGCTGAGATG GGCTTACCTC TAGGCGACAC AGTCTCTCTC ACCGTCACCA ATGATGAAGA GTCAAAAAAA GAGCTAACCT TGACCGTTCA CTCCCAAACC AAGCCCCCCT ATAAAGAGCT TGTCATTGAA AGCCAAGATA AAGACACCAA TCCGATTAAG ATTACAGACC TAGACAAACT CAGCACAAAC AGGAAGCTAT TTTCTCAACT AGAAACAGCA TTCGAAAACC CGCTTACAGT GGTGGATCTT AGGCAAGCCA AAGGATACAG TGATAAGCTA TTAAGCTTAC TGACAAATGA GTTCTCCCCT TCTCTCCCAG AGTCTGCGAA CCCAGTTTTT ACCTTAGCTC GATATCGCCG TGCTTCTAAC TTTAAGAGTG ATTACTTAAG AGCAGACTAT CTTCACCCTT TCAATGAGTT AAACTTCTTC GAACAGGTAC AACTGTCAGA GATAAAAGTG AAACTTGAAA CTCAAGATTC AGATAATTTT AGCCAACTCT ATGCCAGAAA AAGTCGTCCA CAAGCACGTG AAGCTCAACG CTCAAACAGA CTCGCATTGA TTATCGGCCC TCAGTGCAGA CAGGAGTGTG AATGGATAGC CTACCTCACA AAAGCCTGGC CTAGAGTGAC ACTAATAGGT GAAAAAACAT CAGGAGATCT GGGTAAGCAT TACCGCTTTA CACTGCCTAA CAGTAAGCTC AATATCGCGC TAACCAGCAG CCTTCACTAT AACCTCCAAG GTGCTTTAAT CTCCGGAGTT GGCACTGAGC CAGACATCAC CTTTACCGAC AGTGAACCGC TTCACTGGCA AAGCTTAGTG ACTCAGCTTA ACAACCAAGC TTCGCCAGAA AATACACAGC AAACACCTAA GAGTTTTGTC ACAGCCATAA GCAATTGA
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Protein sequence | MNFSFKDVVN VFGICLLLSI LQLSRFLVID NTTKMSLNPQ QMQQDLDTLV AEVSQHSTFS ALDPLLLQSI ENRVDSLRYL YSLGIDSSRF HAEIAKLLAQ LNDPGIKLSS STYSTGQLPF SLKPMGQLWL ALDDSETPLD LEHPFISHID GVALTYWLKT ARKFISSSQQ EDLALTLTWL SRLDLLRAEM GLPLGDTVSL TVTNDEESKK ELTLTVHSQT KPPYKELVIE SQDKDTNPIK ITDLDKLSTN RKLFSQLETA FENPLTVVDL RQAKGYSDKL LSLLTNEFSP SLPESANPVF TLARYRRASN FKSDYLRADY LHPFNELNFF EQVQLSEIKV KLETQDSDNF SQLYARKSRP QAREAQRSNR LALIIGPQCR QECEWIAYLT KAWPRVTLIG EKTSGDLGKH YRFTLPNSKL NIALTSSLHY NLQGALISGV GTEPDITFTD SEPLHWQSLV TQLNNQASPE NTQQTPKSFV TAISN
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