Gene Swoo_0785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0785 
Symbol 
ID6115019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1064971 
End bp1066428 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content44% 
IMG OID641632270 
Productpeptidase S41 
Protein accessionYP_001759175 
Protein GI170725149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000105826 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTA GCTTTAAAGA TGTAGTGAAT GTATTTGGCA TCTGCTTGCT GCTCAGTATC 
CTGCAGCTCT CTCGTTTTTT GGTGATTGAT AACACAACAA AAATGAGTCT AAATCCCCAG
CAGATGCAAC AAGATCTCGA CACCTTAGTG GCAGAGGTCA GCCAGCATTC GACTTTTTCA
GCCCTTGACC CACTACTTCT GCAGAGTATT GAAAATCGAG TTGACTCTCT TCGCTACCTC
TACTCACTAG GCATAGATTC AAGTCGATTT CACGCAGAAA TAGCAAAGCT GCTTGCTCAA
CTCAATGACC CAGGTATCAA GCTCTCTTCA AGCACTTACT CCACAGGCCA ACTGCCTTTT
TCATTAAAGC CCATGGGACA ACTTTGGCTT GCACTAGATG ACTCCGAAAC GCCTCTCGAC
CTTGAGCATC CCTTTATCAG CCATATTGAT GGTGTTGCTC TAACTTATTG GCTCAAAACA
GCCAGAAAAT TTATCTCCAG CTCTCAGCAA GAAGATCTGG CACTCACCTT AACATGGCTT
TCACGTTTAG ATCTTTTAAG GGCTGAGATG GGCTTACCTC TAGGCGACAC AGTCTCTCTC
ACCGTCACCA ATGATGAAGA GTCAAAAAAA GAGCTAACCT TGACCGTTCA CTCCCAAACC
AAGCCCCCCT ATAAAGAGCT TGTCATTGAA AGCCAAGATA AAGACACCAA TCCGATTAAG
ATTACAGACC TAGACAAACT CAGCACAAAC AGGAAGCTAT TTTCTCAACT AGAAACAGCA
TTCGAAAACC CGCTTACAGT GGTGGATCTT AGGCAAGCCA AAGGATACAG TGATAAGCTA
TTAAGCTTAC TGACAAATGA GTTCTCCCCT TCTCTCCCAG AGTCTGCGAA CCCAGTTTTT
ACCTTAGCTC GATATCGCCG TGCTTCTAAC TTTAAGAGTG ATTACTTAAG AGCAGACTAT
CTTCACCCTT TCAATGAGTT AAACTTCTTC GAACAGGTAC AACTGTCAGA GATAAAAGTG
AAACTTGAAA CTCAAGATTC AGATAATTTT AGCCAACTCT ATGCCAGAAA AAGTCGTCCA
CAAGCACGTG AAGCTCAACG CTCAAACAGA CTCGCATTGA TTATCGGCCC TCAGTGCAGA
CAGGAGTGTG AATGGATAGC CTACCTCACA AAAGCCTGGC CTAGAGTGAC ACTAATAGGT
GAAAAAACAT CAGGAGATCT GGGTAAGCAT TACCGCTTTA CACTGCCTAA CAGTAAGCTC
AATATCGCGC TAACCAGCAG CCTTCACTAT AACCTCCAAG GTGCTTTAAT CTCCGGAGTT
GGCACTGAGC CAGACATCAC CTTTACCGAC AGTGAACCGC TTCACTGGCA AAGCTTAGTG
ACTCAGCTTA ACAACCAAGC TTCGCCAGAA AATACACAGC AAACACCTAA GAGTTTTGTC
ACAGCCATAA GCAATTGA
 
Protein sequence
MNFSFKDVVN VFGICLLLSI LQLSRFLVID NTTKMSLNPQ QMQQDLDTLV AEVSQHSTFS 
ALDPLLLQSI ENRVDSLRYL YSLGIDSSRF HAEIAKLLAQ LNDPGIKLSS STYSTGQLPF
SLKPMGQLWL ALDDSETPLD LEHPFISHID GVALTYWLKT ARKFISSSQQ EDLALTLTWL
SRLDLLRAEM GLPLGDTVSL TVTNDEESKK ELTLTVHSQT KPPYKELVIE SQDKDTNPIK
ITDLDKLSTN RKLFSQLETA FENPLTVVDL RQAKGYSDKL LSLLTNEFSP SLPESANPVF
TLARYRRASN FKSDYLRADY LHPFNELNFF EQVQLSEIKV KLETQDSDNF SQLYARKSRP
QAREAQRSNR LALIIGPQCR QECEWIAYLT KAWPRVTLIG EKTSGDLGKH YRFTLPNSKL
NIALTSSLHY NLQGALISGV GTEPDITFTD SEPLHWQSLV TQLNNQASPE NTQQTPKSFV
TAISN