Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0762 |
Symbol | |
ID | 6114996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1037768 |
End bp | 1039498 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641632247 |
Product | potassium/proton antiporter |
Protein accession | YP_001759152 |
Protein GI | 170725126 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAG AAACAATTAA CCATCTCTTT TTGATCGGCG CATTCTTAGT TGCGGTGAGT GTACTGTTAA GTGCAGTTTC ATCACGAGTC GGCATTCCTA TTCTATTGGT GTTTCTTGGT GTAGGTATTC TTGCGGGGGA AGATGGCCCC GGTGGCATCC ATTTCAATGA TTACTCAGTC GCTTATCTGG TCAGTAATTT AGCCTTAGCG GTTATCTTGC TCGACGGCGG TATGCGCACC CGAGTGTCCA GTTTTCGTGT GGCGCTTTGG CCCGCACTCT CACTTGCTAC CTTTGGGGTG GCGATTACAA CAGGCTTAAC TGGCTTAATG GCCGCTTGGC TGTTCGACTT GAACCTGCTT CAAGGTCTTC TCATTGGCGC TATTGTTGGT TCGACTGACG CCGCAGCGGT TTTCTCCCTG TTAAAAGGTA AGCGTTTAAA CGAACGTGTT GGCGCGACAC TTGAAATTGA GTCAGGCAGT AACGATCCTA TGGCGGTCTT TCTCACTGTG ACCTTGATTG CCATATTGGC CAGCGTGGGA GACGGGTTAT CAGTCAGCTT TATGGCTATG AGCTTTATCA AGCAGTTCGG CATCGGCGCA CTGATGGGAG CGGGAGGAGG TTGGCTGTTA TGGCAGCTGA TTAACCGTAC TCAGCTAGCC GATGGCTTGT ACCCTATTTT GGCCCTTAGT GGTGGTTTGA TTGTCTTTGC CACATCAAAC TATTTAGGCG GCAGTGGGAT CTTATCTGTC TACCTTGTGG GGCTGCTTTT AGGAAACAAA GCCACCCGTG GTCGTCATGC AATATTAAAT GTGCTCGATG GCATGACCTG GTTGAGCCAA ATCGGCATGT TCCTCGTGCT GGGCTTGCTG TTAACACCGT CTGAGTTAAC CAATGTGGCG ATCCCCGCAT TGGCCTTGGC TTTTGGTATG ATCTTGTTTG CTAGACCTAT CTCTGTGTGG CTAAGTCTGC TGCCCTTTAA GAGCTTTAGT GCAAAAGATC GCTGGTTTAT CTCTTGGGTC GGTTTACGTG GGGCGGTGCC GATCATTCTG GCTGTGTTCC CTATGATGGC AGGTTTACCC AATGCCCAAC TCTATTTCAA TGTGGCCTTC TTTGTGGTTT TAGTCTCTTT GCTGGTTCAA GGTTGTTCGC TGGGCAGGGC GGCAAGACTA GCAAAGGTCG ACCTGCCTCC TGTGCCTAGC CCGATCTCGC GTGCTGGATT GGAGATCTAC CCTAAGAGTG AGTGGGAGCT GTTTGTTTAT CACCTCAGCG AAAACAAATG GTGTGTCGGT GAGCCATTAA GAAAGCTCAA TATGCCCAAA GGAACCCATA TTGCCGCGCT ATATCGTGGT AATGAGATGC TGCACCCATC AGGAAGCACC ATATTAAGCA CCGGAGATAT ACTCTGTGTG CTCGGTCATG AGGATGATCT CGATGCATTA GGCACGCTAT TTAGTGAACC GCCAGTGACA AAAGCCTTGC CTCGATTTTT TGGTGACTTC TTCCTGAGTG TTGACATTGA GCTGTCGGCC CTTGCACCTA TGTATGGACT CAAGCTGGAT GAGAAAGTGG CCAAGATGTC AGTGGGTGAG CTCATCAATG AGCACTTGGT TGGCGAGCAT GTGTTAGGGG ATCAATTTGA GTGGCAATCT CTGCACTGGA TCATCTGTGA GCTGGAGCAG GGCGAGGTGA CCAAAGTGGG AATACGGCTC CCCTCAGAGA TCACGACATA A
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Protein sequence | MNAETINHLF LIGAFLVAVS VLLSAVSSRV GIPILLVFLG VGILAGEDGP GGIHFNDYSV AYLVSNLALA VILLDGGMRT RVSSFRVALW PALSLATFGV AITTGLTGLM AAWLFDLNLL QGLLIGAIVG STDAAAVFSL LKGKRLNERV GATLEIESGS NDPMAVFLTV TLIAILASVG DGLSVSFMAM SFIKQFGIGA LMGAGGGWLL WQLINRTQLA DGLYPILALS GGLIVFATSN YLGGSGILSV YLVGLLLGNK ATRGRHAILN VLDGMTWLSQ IGMFLVLGLL LTPSELTNVA IPALALAFGM ILFARPISVW LSLLPFKSFS AKDRWFISWV GLRGAVPIIL AVFPMMAGLP NAQLYFNVAF FVVLVSLLVQ GCSLGRAARL AKVDLPPVPS PISRAGLEIY PKSEWELFVY HLSENKWCVG EPLRKLNMPK GTHIAALYRG NEMLHPSGST ILSTGDILCV LGHEDDLDAL GTLFSEPPVT KALPRFFGDF FLSVDIELSA LAPMYGLKLD EKVAKMSVGE LINEHLVGEH VLGDQFEWQS LHWIICELEQ GEVTKVGIRL PSEITT
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