Gene Swoo_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0707 
Symbol 
ID6114941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp966819 
End bp967943 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content36% 
IMG OID641632192 
Producthypothetical protein 
Protein accessionYP_001759097 
Protein GI170725071 
COG category[S] Function unknown 
COG ID[COG4938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.852427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA AACTATCTAT CAGCAACTTT AAAAGTATTG ATAAAGAAAA ATTAAAAATC 
GCACCACTAA CGATCCTTAC GGGGATTAAC TCGACGGGAA AGTCTACTGT AATTCAAGCT
ATTTTATTGC TTTTAAGGTT TGCTATACCT GTAAACCGTG TCACATTGAA TAAAGTTGTT
TCTGCTTATG TTTCTCCAAG AGATACTCGA AACCGATACA CTAACCAATC TGACATTAAT
ATCGAACTAG AGCTGAATAG CGAAGTCTTT GATTCTCTTT TACTTCAAAC AATAAAAAGT
GAGGATGATC AGGTTTTGTT TCGTGGTGGT ATTAAGCCAA CGGAAAAGTA CATAGGAAGT
GGTGAATTTA ATCCCGCAGA ACCCCCTTTA ACATATGTTT ATGAACCTGA GGAAGGAGCG
TCGAATTGCT CTGAACTCTT CTATCTTAAT GCAACAAGAT TGGGCCCTCA AAGTACCTCC
GAAGTCGGTG ACTTTAAAGT AGGTTTGTTG GGGGAGCTTA TTTTCTCTAC TTATGATCAA
ATTAAAAATC AAGCTCTACC AGAAAAGTTA GTTAAGTTTT CTGAATCCAG CACTATAGGT
TATCAGGTGA GTCAGTGGCT CAGTAAAATC ACTGATTCAA AGCTAGAGTT GAGGACTGAA
AAAATTAACA GTGAACAGAT TAAAGTTTCT TTTAATAGTG ATGGACTCGA AGAGCTATCT
CCTCAAAATC TTGGGGCAGG TATAAGCTAT CTAGCTAAAG TGGTAATCCT ATGCTTTATG
GCTAAAAAAG GTGATTTAGT TATTATAGAA AATCCTGAAA TTCACCTTCA CCCTAAATCA
CAGGCTCAGT TAGGAGTCTT TTTTTCCTTT ATTGCGAGCA GTGGAATTCA ACTGATTATT
GAAACTCATT GTGAACATTT GATACAGAAA ATCAGGGGAG AGGTAAGAAA TGAGGCCATT
GAGTGTGAAG ATGTTGTCAT TCACTACAAA TCCGCTACAT TAAAACCTTT TGATACTTTA
TTCTTAGATG CTAATGGTCA TTATTGTGAT CAAGAAGAAA ATCGTATCAG TTTTCCTAAA
GGGTTCTTTG ATACCAGTGT CGATACTTTA CTGAGTTTAC GATAG
 
Protein sequence
MLKKLSISNF KSIDKEKLKI APLTILTGIN STGKSTVIQA ILLLLRFAIP VNRVTLNKVV 
SAYVSPRDTR NRYTNQSDIN IELELNSEVF DSLLLQTIKS EDDQVLFRGG IKPTEKYIGS
GEFNPAEPPL TYVYEPEEGA SNCSELFYLN ATRLGPQSTS EVGDFKVGLL GELIFSTYDQ
IKNQALPEKL VKFSESSTIG YQVSQWLSKI TDSKLELRTE KINSEQIKVS FNSDGLEELS
PQNLGAGISY LAKVVILCFM AKKGDLVIIE NPEIHLHPKS QAQLGVFFSF IASSGIQLII
ETHCEHLIQK IRGEVRNEAI ECEDVVIHYK SATLKPFDTL FLDANGHYCD QEENRISFPK
GFFDTSVDTL LSLR