| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0701 |
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| Symbol | |
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| ID | 6114935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 958206 |
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| End bp | 959285 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641632186 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001759091 |
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| Protein GI | 170725065 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00519502 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAA TTAAACAGTT TTACAGTAAA GAGGAACTTC AAGAGCAAGC TGCTTTGTGG
ATAAGCCGTA TCGATAGAGG CTTATCTGAG GTTGAAATAG ATTCACTGTC TAAATGGGTT
AGTGAGAGTA AGGCTCATCA AGATGCTCTG TTTGAGATGG CTTCCTATTG GGACGATTTA
AGTGTTCTTA ATGAACTCAG CGTGCTTTTC CCTCTTGAAA CAGCAAAAAA TAAGTCTAAA
TGGCAGTACG CAGCCATCGC TGCAAGTTTT CTGCTGCTCT CTTTTGTTGG AGGAAATTGG
CTTTTAGGCG GCCAAATCTC TCAACATATC TGGGGGGCAG GTGAAATCTA CACCCAAAGG
TTAGAGAGTC CTGTCGGCAA ACAAACAAGC TTCTCTCTAC CTGATGGAAC TCAAGTTCAG
TTAAACACCA ATAGTGTTGT CGAGGTCGAT TATTCATCAA ACTATCGCCA GCTTACTTTA
GTGACTGGTG AGGCTAAATT CGATGTGGCT AAAGATAGGT CTAAGCCTTT TACTGTCACA
GCTGGTGTGC AAGCATTTAC AGCCCTAGGT ACGGTTTTTA ATGTTCAGAA AAATGATGAA
CAGGATATGG AGTTAGTGGT TACTCACGGC AAAGTACTGG TAACCTCTGT CGATAAGAGC
CTAGAGCAGA TTAAAGAATC ACTCAGTGAT ATTGCTGAGC AGAGCTTACC GGGATTGTTA
GTTTCCACCG GCGAGAAGGT CGTGATTGCT AAAAACACCA GCTTGGCCGT TGAAGCTTTG
CCGCTTGAGC AGATGCAACG TGATCTGGCT TGGCAACAGG GGATGCTTAT TTTTGAGGGT
GAGCCTTTAT CCCAAGCATT AGACGATGTA AGCCGCTATA CGTCGGTTAA ATTCGAGATT
GTCGATCCAG AACTGTCAGA ACTGAAAGTG GCAGGCTACT TTAAAGCGGG TGATGTTGAT
GGCTTACTGG CCTCTTTAAG CAGTAATTTT AACATAGTTC ATGTTAAAGA TAGTGACAAT
ATCATTCACT TAACTGCACC AAGTAACACT AATCCTACAA AAAAATTAAC AATACAATAG
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| Protein sequence | MSTIKQFYSK EELQEQAALW ISRIDRGLSE VEIDSLSKWV SESKAHQDAL FEMASYWDDL
SVLNELSVLF PLETAKNKSK WQYAAIAASF LLLSFVGGNW LLGGQISQHI WGAGEIYTQR
LESPVGKQTS FSLPDGTQVQ LNTNSVVEVD YSSNYRQLTL VTGEAKFDVA KDRSKPFTVT
AGVQAFTALG TVFNVQKNDE QDMELVVTHG KVLVTSVDKS LEQIKESLSD IAEQSLPGLL
VSTGEKVVIA KNTSLAVEAL PLEQMQRDLA WQQGMLIFEG EPLSQALDDV SRYTSVKFEI
VDPELSELKV AGYFKAGDVD GLLASLSSNF NIVHVKDSDN IIHLTAPSNT NPTKKLTIQ
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