| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0693 |
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| Symbol | |
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| ID | 6114927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 949562 |
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| End bp | 950731 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641632178 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001759083 |
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| Protein GI | 170725057 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA AGCTATTTTT ATTACTATCT TCACCTGTTA ATGAGTTCGA AAATCGTGTC
TATACGGCGC GAATCGCCAT TTATTTTAGC CAAAGTATTA AAAACTCACC ACTACTGCTC
ATGGCTTCAT TGATACTGTC GAGTTATCAA ACTTACCTAG ACTCATCATT GATTTTATTA
GCAATTTGGC AAAGTGTTTT TGCAATTACT ATTGTTGCCA TCTACTTAAT AGATAAAGAA
GGCAATACAC TCGTCTCCGA AAATGCAGAC TACCCAGCAC TTAAAAAAAA GCTCACTCAA
CGCTTTTATT TCGGTCTATT TATTGGACTA TTATTCTCCC TTAGCCCCTT CACACTCTTA
AACGATGTAC CGCTGGATCA TGTACAGCTT TACTATATAT TTTTAATCTG CTTATTCGCG
ATTATTTTAA TAAGTAACAT TAGCTTTCCC GAGTACTATA TCGCTTACGG CATACTGATC
CTGCCCTCGA TCCTGCTTCA TGCACTCACT CGCTTCGATG ATCATAGTCA GGGAGTCATC
GCTTTCTCAT CTTTTTTCTT ACTGTTCGGG GTTTTATTGA TGAGCCGTAA ATCAATCGAG
ATGTCTAAAA GTGCACTCAA TGAAGTGGTC TACAGCATCA CCTTAAAAGA TCAAATGCTT
GAGATGATAG AGATGCAAGA AGTGATAGAG CACCAAGCAC ACCATGATGA GTTAACCGGA
TTAGCAAATC GACGTAAATT TGAGGAGGAA GCGGTAAAAA TAGAGAACAG AGCCAAAAAC
TTTGGTGGCA TATTTGGCCT CATCTATGTA GATCTAGACA AATTCAAACC TATCAATGAT
ACCTACGGCC ATCAATATGG GGATTGGGTA CTTCAAGAGA TAGCAAAACG GATCACTAGC
TGCACAAGGG AAACAGACCT TGTCTGTCGT ATGGGAGGCG ATGAGTTTTG CGTGCTAATC
AAAAACGTCA CAGATAAAGC TGAGCTAGAG CATCTGTCTG AGCTATTAAA AAATCGAATC
AAGATGCCCT TTGCCATAGA CGGTATCGAT TTCAAATTGG GTGCTAGCAT GGGCGCTGCT
ATCTACCCAG CCGATGGCAA GAATGTAGAC TCATTAGTAT CCAGTGCAGA CCATAAGATG
TATGCAGAGA AAAAAGCTGC ACAAAGCTAA
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| Protein sequence | MKKKLFLLLS SPVNEFENRV YTARIAIYFS QSIKNSPLLL MASLILSSYQ TYLDSSLILL
AIWQSVFAIT IVAIYLIDKE GNTLVSENAD YPALKKKLTQ RFYFGLFIGL LFSLSPFTLL
NDVPLDHVQL YYIFLICLFA IILISNISFP EYYIAYGILI LPSILLHALT RFDDHSQGVI
AFSSFFLLFG VLLMSRKSIE MSKSALNEVV YSITLKDQML EMIEMQEVIE HQAHHDELTG
LANRRKFEEE AVKIENRAKN FGGIFGLIYV DLDKFKPIND TYGHQYGDWV LQEIAKRITS
CTRETDLVCR MGGDEFCVLI KNVTDKAELE HLSELLKNRI KMPFAIDGID FKLGASMGAA
IYPADGKNVD SLVSSADHKM YAEKKAAQS
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