Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0666 |
Symbol | |
ID | 6114900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 919524 |
End bp | 920849 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632152 |
Product | biotin/lipoyl attachment domain-containing protein |
Protein accession | YP_001759057 |
Protein GI | 170725031 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.188115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0158775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTA ACGTTAAAAA GCTCTCATCG GTATTGATGG CGACAGTGTT TACTTTTACA GCAATCAGTT TCACTGCGCT GCAACCGACA AACCTTGCAT GGGCAAGTGG CGATCATGGG CATGGACATG AGGAGGAAGA GGAGCATGTT CCAGAAGGCC CCCATGGTGG TCGTCTACTC CACAATGGGG AGTTTGAGAT TGAGGTGACC ATGGTTGAGT CGGGGATCCC GCCAGAGATG AGGGTATATG CCTACTACAA AGAGCAGGCT GTAAAGCCTG AGGATATTAA GCTTGAACTG CTGTTAAATC GTCTCGGGGG AAAAACTGAC ACCGTTAACT TTACTGCTGA AGGTGACTAT CTCGTCAGCA CTACAAGTAT TGCGGAGCCT CACTCTTTTG AAGTTGAGGT TCATGCTGGC TTTAAGGGGC AATCCTATGA TTGGCATTAT GACAATTATA CCGGTCGCAC CGAGATCAAT GACCGTCTGC TAAAGCTATC GGGAGTGAAA ACGGCTCAAG CCAGTGAGCA GGAGTTACTG TTTACCGATA CCCTGTTTGG CATTGTTGCC CCTATTACCG ATAAGCAGTT TAGCGTTACC GCGCCTTACA CTGGTGTGAT TGAACAGCTG CATGTGAGTA TTGGTGAGAG AGTTGAGAAA GGCCAAGTGA TCGCAACGGT ACGTAACTCT GGCACGCTGC AAAGTTATCA GGTTAAAAGC CCTGCTGCAG GTCAAGTGAC TGAGCAGCTT CTTAGTTTAG GAGACAGCAC CTATAACAGA GCCCTTGTTC GTATCAGCGA CCTCTCATCT GTGTGGATAG ATCTGTCAGC TTTCCCTAAA AGCATAGATA AGTTGTCGCT GGGGCAAAAG GTGAGCATCC TTGACGATCA CAGCGATGAA GTCAGCTCTA GTGAACGGTC AAATGATCAG TATAGTAATC AGCACAATAG CGCTGTAGCC AGTAGCACAA TTAGCTATAT CGCCCCCAAT ATGACTGGCG GGCATATTGC TCGTGTTCGC GCTGTGATTG AGAATGACCA TGGTCATTGG CGTCCCGGCA TGCATATTCA AGCTGCCATT GAGACCAGCA GTAAGCGGGT GCCTCTAGCC GTGCGCGTCG ATGCGCTGCA GACCTTTATG GATAAGCCCG CTGTATTTGT TAAGCATGGC AATACCTTTG AGGTGCGCCT GCTGACCTTA GGTGAGAGCG ATGGCATCTA TACCGAAGTG TTAGCTGGGC TGGAGCATAA CAGCGAATAT GTTGTTGAAA ATAGTTATCT ATTAAAGGCG GATATTATGA AAAATGCCGC TAAACATGTG CACTAG
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Protein sequence | MDLNVKKLSS VLMATVFTFT AISFTALQPT NLAWASGDHG HGHEEEEEHV PEGPHGGRLL HNGEFEIEVT MVESGIPPEM RVYAYYKEQA VKPEDIKLEL LLNRLGGKTD TVNFTAEGDY LVSTTSIAEP HSFEVEVHAG FKGQSYDWHY DNYTGRTEIN DRLLKLSGVK TAQASEQELL FTDTLFGIVA PITDKQFSVT APYTGVIEQL HVSIGERVEK GQVIATVRNS GTLQSYQVKS PAAGQVTEQL LSLGDSTYNR ALVRISDLSS VWIDLSAFPK SIDKLSLGQK VSILDDHSDE VSSSERSNDQ YSNQHNSAVA SSTISYIAPN MTGGHIARVR AVIENDHGHW RPGMHIQAAI ETSSKRVPLA VRVDALQTFM DKPAVFVKHG NTFEVRLLTL GESDGIYTEV LAGLEHNSEY VVENSYLLKA DIMKNAAKHV H
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