| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0665 |
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| Symbol | |
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| ID | 6114899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 918163 |
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| End bp | 919524 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632151 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001759056 |
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| Protein GI | 170725030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000306808 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00231848 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGAGAT ATCTAGAGAG CGCACTGCTT GCCTGTAAAG GTGGGCTGAT GATTGCGAGT
GCCTGTACCC TTGTGTTATT GCCAATGAAA GGGGTTGCAG CTGTCACCTC TGAGTCGGCA
AGTGACAAAA CAATAACCTT GCCATGGGTG TTGGAGAAAA CCTTACTCTC CAACCCTCAA
CTACAGAGTT TTCCCTATGA GTTAAGGGTG AGTGAAGCGC TCACGCTGCA GGCGGGGATC
ACACCTAATC CTAAGCTGTC TGTCGAGCTT GAAAATCTGC TTGGAACCGG TGATAAACAA
GGCGTGGAGA ATGCCGAGGT AAGCTTAGGC CTGAGTCAGT TAATTGAACT CGGTGATAAG
CGCCAGAGAC GGATCGATTT TGCCCACGCC TCAAAGCGTC AGAGTCTGGC TGAATATGAG
TTGCTTCGTC TGGAAGTCTT ATCTCAGGCT ACTCTGAGCT ACTATCAGCT GCTGCGTTTT
CAAGCTCTGC TTGAGTGGAA CCAGCAAGGC ATTCAAATAG AGCAGAAGGC ATTAAAGGCG
ATAGAGCTGC GGGCCAAGGC TGGCGCAGTG GCTAAGGCCG ATGTGACTAA GATGGCGCTG
AGATTAATGC GAGCTCGTTC AGCACAGCAG CAACTTGAGG GTGATATTCA GGTTGCTAAG
CAAAGGCTAG CAGCCAACTG GGCGGGTGAG GCACATTTTG ATCGTGCAGA GGGGGAGCTT
GCTAGTTTAA CTGAGTTACC GAGTGCAGCA GATGTGCTTA ACGCTATAGA AACTGCACCA
CAATATTTGC AGCTATTGAG TGTTGAGCGG CTCATGTATG CCAAGCGCCG TGTTGAAGAG
TCAAAGGCTC AATACGATAT CACTTTAGGC ATGGGAATAC GCAGCTATGA TGGCTTTGAC
GATGCTGCAT TGATGTTTAA TTTCTCAATG CCTATTCCTC TCTCTAACCC AAATCAGGGC
AATATCTTAG CGGCCAAGGC TAATGAAAGT CTGGCGATGG AGCAGCAAAA GCTAGTGCGA
GGTCAGCTTA AGCTTACTCT ACTTGAGGTC CATCAGAGCA TGGTCAACAG TGCTCGTCAG
GCTGAGTTGC TCCAAAAGGA GCTGCAACCT TTAGCTCAGC GACTACTAAA AGAGACTGAG
CTCGCTTATC AAACCGGGCA AGCCAATGTT CTGCAGCTGG CCGATGCGCA ATCTGAGCTG
CAGAATATTA AGCGTGAGCT TATTGAGGCT AAAACGGCTG TTTACCTGCA AAAACTTGAG
CTTGAGCGCA TCACTGGCCA ATCGATGAGC GCTGCTCATC AACGCCAACT ATCCCACTCT
TTTTTAAATA CTGAGCCTAT GATGGCGCAG GAGAATCACT AA
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| Protein sequence | MKRYLESALL ACKGGLMIAS ACTLVLLPMK GVAAVTSESA SDKTITLPWV LEKTLLSNPQ
LQSFPYELRV SEALTLQAGI TPNPKLSVEL ENLLGTGDKQ GVENAEVSLG LSQLIELGDK
RQRRIDFAHA SKRQSLAEYE LLRLEVLSQA TLSYYQLLRF QALLEWNQQG IQIEQKALKA
IELRAKAGAV AKADVTKMAL RLMRARSAQQ QLEGDIQVAK QRLAANWAGE AHFDRAEGEL
ASLTELPSAA DVLNAIETAP QYLQLLSVER LMYAKRRVEE SKAQYDITLG MGIRSYDGFD
DAALMFNFSM PIPLSNPNQG NILAAKANES LAMEQQKLVR GQLKLTLLEV HQSMVNSARQ
AELLQKELQP LAQRLLKETE LAYQTGQANV LQLADAQSEL QNIKRELIEA KTAVYLQKLE
LERITGQSMS AAHQRQLSHS FLNTEPMMAQ ENH
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