| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0644 |
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| Symbol | |
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| ID | 6114878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 890624 |
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| End bp | 891289 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632130 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001759035 |
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| Protein GI | 170725009 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0140532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000001613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAACCAAA TCGATGAACT TGTCTTTTTT CATCAAATTG AAGCGCCATG TCATTTAGCT
ATTTTGGCTC AATCGATTGG ATTAAAGACT CGGATTGTCA GTAAGTCTTC AGAGCTTTTT
GATGGGCTAC TATCAAATAG TTTCTGTTTT ATTGCTCAAA AAGGGGAAGC TCTGGATAAT
AAAGGAATTC CTTTAATAGC ATCCAGGCTT GCGTCGCATT GTCCTGTAGC GCTTCATCAG
GTTGAGCCCA ATACGTTAGA GGTTGAGTCT GCGCTGCTTT TGGGAATTAA AGGTGTGCTT
TATTCTAATC AAGGAATGGA CTCTTTGATG TCTGGGATTA CCAATATGGT AGAGGGTGAG
CTCTATTTTG ATCGACAGTT GATCAGCCAG GTTTTCAGCC GTCTTGTACG TAAACTAGAC
AGTGCCAATG ACACATTGCA AGATAGCGCA GTGATGATGC AGATGCTAAC GAGTCGAGAG
AGAACGATTA TTAGTTTAGT GTCGAGTGGT GCGAGAAATA AGGAGATAGC TCATAGACTA
TGTATCAGTG AGCATACTGT TAAGGCTCAC ATTTCATCTA TCTTCAGAAA GACGCAATCT
CGTAACCGTG TTGAACTGCT AAGGTGGGCA CAAAGTTATC AGAGTCAGCT TGAGTTATGT
TCTTAA
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| Protein sequence | MNQIDELVFF HQIEAPCHLA ILAQSIGLKT RIVSKSSELF DGLLSNSFCF IAQKGEALDN
KGIPLIASRL ASHCPVALHQ VEPNTLEVES ALLLGIKGVL YSNQGMDSLM SGITNMVEGE
LYFDRQLISQ VFSRLVRKLD SANDTLQDSA VMMQMLTSRE RTIISLVSSG ARNKEIAHRL
CISEHTVKAH ISSIFRKTQS RNRVELLRWA QSYQSQLELC S
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