Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0563 |
Symbol | |
ID | 6114797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 792932 |
End bp | 794209 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632049 |
Product | major facilitator transporter |
Protein accession | YP_001758954 |
Protein GI | 170724928 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA ACAAGCTGAT TCTGGCCTTA GTTTTACTGA CATTCTTCGT GGTGTCTTTT ATTACCAATA TACTCGGCCC CCTATTTCCC TCTTTGATAG CCGACTTTAA TTTAAGTCTA GCACTCGCAG GATTCCTGCC CTTCTCCTTC TTTGCAGCAT ACGGGGTGAT GTCTATCCCA TCTGGGATGT TAGTCGACAA GTTCAGTGAA AAGCCAGTGC TCTTTCTGGC TTTTCTCATG GCAGCCTTAG GCTCACTACT GTTTGGAATA TCACCGAACT TCTATATGGC GATGCTCTCT CTGTTTCTCA TAGGTACAGG CATGGCGATG TTACAGGTAG CCATCAACCC ACTATTACGA GTTGTTGGTG GTGAGGAGCA TTTCGCTTTC TACTCAGTAT CAGCCCAACT TCTCTTTGGG GCAGCCGGTG CTCTTAGCCC ACTGGTCTAC AGCAAGGTGG TGCTTGCCAT CGACGAACCT AACACAAGCA GTGCCATGGT CAGCACCCTG CAAGCACTCG TCCCCGCAAA TATGACTTGG GTCTCCATGT ATTGGATATT TGCACTTATC TCATTAATGA TGTTAATGCT TATCACCTTG CTTAAATTCC CTAAGGTTGA GCGTAATGAA GCGGAGTCCA TCGGTGCAGT AAAAGTATAT GTATCACTAT TTAAAGATAA GAAAATTGTC CTATTCTTTC TTGCCATCGC CGCCTATGTG GGAACAGAAC AAGGAGTTGC TAACTTCATC TCCATCTTCC TGCAACAGCA GCACGGATTA GATCCAGTAA CCCAAGGAAC AGCTGTATTA AGCCAGTTCT GGTTGATGCT GACACTAGGG TGTGTGCTCG GGCTAATACT GGTTAAGTTT TTAGACAGCA GACTCGTGCT CAAACTCTTC TCTGTCAGCG CCATCATCTC CCTAACGGCC GGATTATTTG GCAGTAAAGA GGTCGCATTA ATGGCCTTTC CTATGGTTGG ATTTTTCCTT TCAGTCATGT GGTCAGTCAT CTTCTCATTG GCACTAAACT CAGTCCCCAA ACATCATGGC TCTGTAGCAG GTATTCTCTG TACTGGCATT ATTGGCGGTG GCCTTGCTTC ACCTATGGTA GGGGCAATCG CCGACATATC TGGTGACCTT CGTCTGGGCA TGGTCGTTGT TTACATCACT CTATTTTATA TTTTGAGTGT TGGATTCTGG GCGAAACCAC TCATCAATAA TAAAACGATT AACCTATTTA AAAACAGAAA GGAGGAAACG ATTCAAACAA GTAATTAA
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Protein sequence | MNKNKLILAL VLLTFFVVSF ITNILGPLFP SLIADFNLSL ALAGFLPFSF FAAYGVMSIP SGMLVDKFSE KPVLFLAFLM AALGSLLFGI SPNFYMAMLS LFLIGTGMAM LQVAINPLLR VVGGEEHFAF YSVSAQLLFG AAGALSPLVY SKVVLAIDEP NTSSAMVSTL QALVPANMTW VSMYWIFALI SLMMLMLITL LKFPKVERNE AESIGAVKVY VSLFKDKKIV LFFLAIAAYV GTEQGVANFI SIFLQQQHGL DPVTQGTAVL SQFWLMLTLG CVLGLILVKF LDSRLVLKLF SVSAIISLTA GLFGSKEVAL MAFPMVGFFL SVMWSVIFSL ALNSVPKHHG SVAGILCTGI IGGGLASPMV GAIADISGDL RLGMVVVYIT LFYILSVGFW AKPLINNKTI NLFKNRKEET IQTSN
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