| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0512 |
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| Symbol | rho |
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| ID | 6114746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 725933 |
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| End bp | 727198 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631999 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001758904 |
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| Protein GI | 170724878 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.855654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00605573 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTAT CAGAACTAAA AGATAAGTCG ATTTCAGACT TAGTACTACT CGCCCAAGAA
ATGAAAGTTG AGAATACTGC CCGTGCTCGT AAGCAGGACA TTATATTTTC AATCCTTAAA
GCCCACGCCA AAAGCGGTGA AGATATTTTC GGTGGTGGTG TATTAGAAAT TCTACAGGAC
GGTTTCGGCT TCCTTCGTAG CGCAGACGCC TCTTACTTGG CAGGACCGGA TGATATCTAT
GTATCTCCAA GCCAAATACG TCGCTTTAGC ATGCGCACCG GTGATACCAT TTTTGGTAAA
ATCAGACCAC CTAAAGAGGG CGAACGTTAT TTTGCTCTTT TAAAAGTCTC TGAAGTCAAC
TTTGACAAGC CTGAAAACTC TCGCTCTAAA ATCCTATTTG AAAACCTTAC CCCACTACAT
GCAGAAGAGC GTATTCGCAT GGAGCGCGGT AATGGTTCAA CTGAAGATAT TACTTCACGA
ATTTTGGATC TATGTTCACC AATCGGTAAA GGCCAGCGTG GTCTTATTGT TGCACCGCCA
AAAGCGGGTA AAACATTACT GCTTCAGAAC ATGGCTCAAA GCATCACTTA CAACAACCCA
GACGTCGTAT TGATGGTTCT TCTTATCGAT GAACGTCCTG AGGAAGTTAC CGAGATGCAA
CGCATGGTAA AAGGTGAAGT AATTGCTTCT ACCTTCGATG AGCCAGCCAG CCGTCACGTT
CAGGTTGCTG AGATGGTTAT CGAAAAAGCA AAACGCCTTG TTGAGCACAA GAAAGATGTT
GTTATCTTAC TCGACTCAAT CACCCGTCTT GCCCGTGCTT ACAACACAGT TATCCCATCA
TCAGGTAAGG TACTTACTGG TGGTGTTGAT GCTAACGCAC TACATCGTCC AAAGCGTTTC
TTCGGTGCCG CTCGTAACAT CGAACATGGC GGAAGCTTAA CCATTATCGC AACCGCACTG
GTTGATACTG GTTCTAAAAT GGATGAAGTT ATTTACGAAG AGTTTAAAGG TACTGGTAAC
CAAGAGTTAC ACCTTTCTCG TAAAGCGGCT GAAAAGCGCG TCTTCCCTGC TATCGACTTC
AACCGCTCAG GTACGCGTCG TGAAGAGAAG CTAACCACAC CTGATGAGCT ACAGAAGATG
TGGATCCTAC GTAAGATCCT TAATCCAATG GATGAGGTCA CAGGTATGGA GTTCCTTATC
GACAAGCTTG CTATGACCAA GACTAACGAT GAGTTCTTCA CTGCGATGAA GCGTGCTAAG
ACTTAA
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| Protein sequence | MNLSELKDKS ISDLVLLAQE MKVENTARAR KQDIIFSILK AHAKSGEDIF GGGVLEILQD
GFGFLRSADA SYLAGPDDIY VSPSQIRRFS MRTGDTIFGK IRPPKEGERY FALLKVSEVN
FDKPENSRSK ILFENLTPLH AEERIRMERG NGSTEDITSR ILDLCSPIGK GQRGLIVAPP
KAGKTLLLQN MAQSITYNNP DVVLMVLLID ERPEEVTEMQ RMVKGEVIAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALHRPKRF
FGAARNIEHG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN QELHLSRKAA EKRVFPAIDF
NRSGTRREEK LTTPDELQKM WILRKILNPM DEVTGMEFLI DKLAMTKTND EFFTAMKRAK
T
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