| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0506 |
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| Symbol | prmA |
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| ID | 6114740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 719057 |
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| End bp | 719938 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631993 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_001758898 |
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| Protein GI | 170724872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0662184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00329443 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTTGGA TCCAGTTAAA AATCGATACC GATAATCAAC ATGCCGACAC ACTCAGCGAT
CTACTGATGG AGGAGGGGTC ACTCTCTATC ACATTAGAAG ATGGTAAAGA CACACCCATT
TTTGAGCCTA CATTAGGCGA AACGCCCCTG TGGAACCACA CGGTGCTGAC AGCGCTATTC
GAAGCCGATC GCGACCTGAG CATAGTGGTT GACAATTTAA AGCTACAGCC GTTTCTAGGC
GCTGATTTCA GCTATAAAAT TGAGCAAGTT GAAGATAAAG ATTGGGAACG TGAATGGATG
GATAACTTCC ACCCCATTAA GTTTGGTGAG CGTTTATGGA TCTGTCCAAG CTGGCGTGAG
ATCCCCGATC CAGAAGCGGT TAATATTATT CTCGATCCAG GTCTCGCCTT CGGTACAGGT
ACTCATCCAA CAACGGCTCT GTGTCTAGAG TGGTTAGATA GCCTCAACTT CGACAATAAA
GAGGTGATCG ACTTTGGCTG TGGCTCAGGT ATTTTAGCGG TCGCCGCACT GAAACTTGGT
GCAACTAAGG TCACAGGGAT CGATATCGAT TACCAAGCTA TCGATGCCTC TAAAGCGAAT
GCAGAGCGAA ATGGCGTAGA AGATCAATTG ACACTCTATC TACCAGAAGA TCAGCCTGAA
AATCTTAAAG CCGATATCTT AGTCGCCAAC ATACTTGCAG GCCCACTTCG AGAGTTAGCG
CCACTGATTG CAGAAAAAGT TAAACCTGGT GGACAACTGG CGCTATCAGG CCTATTACAA
GAGCAAGCAC TCGAAGTTGC AGAGTTTTAT ACTCAGTGGT TTGATATGGA TGAGCCCGCT
CACAAAGAGG AGTGGAGCCG CTTGACAGGA ATACGTAAAT AA
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| Protein sequence | MPWIQLKIDT DNQHADTLSD LLMEEGSLSI TLEDGKDTPI FEPTLGETPL WNHTVLTALF
EADRDLSIVV DNLKLQPFLG ADFSYKIEQV EDKDWEREWM DNFHPIKFGE RLWICPSWRE
IPDPEAVNII LDPGLAFGTG THPTTALCLE WLDSLNFDNK EVIDFGCGSG ILAVAALKLG
ATKVTGIDID YQAIDASKAN AERNGVEDQL TLYLPEDQPE NLKADILVAN ILAGPLRELA
PLIAEKVKPG GQLALSGLLQ EQALEVAEFY TQWFDMDEPA HKEEWSRLTG IRK
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