Gene Swoo_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0502 
Symbol 
ID6114736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp713352 
End bp714833 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content46% 
IMG OID641631989 
ProductN-6 DNA methylase 
Protein accessionYP_001758894 
Protein GI170724868 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.173184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCA GTTCAGCGAT TAAATCCATC CAAGATATTA TGCGTAAAGA TGCCGGTGTT 
GACGGCGATG CCCAGCGCCT AGGGCAAATG TCTTGGTTAC TTTTCCTTAA AGTGTTCGAT
GCCCAAGAGG AAGAGTTAGA GCTTGAACTA GACGATTACC GTGAGCCGAT CCCAGAACAG
TTCTTGTGGC GCAACTGGGC TGCTGACAAT CAAGGCATCA CTGGTGAAGA GCTACTGGAT
TTTGTAAACG ATGAGCTATT CCCACAGCTT AAAAACCTCA CTGCGCCGAT AGATAAAAAC
CCGCGCGGTT ATGTAGTCAA AGAAGCATTC TCAGATGCCT TTAACTACAT GAAAAACGGT
ACCCTACTGC GCCAAGTGAT CAACAAGCTT AATGAAATCG ACTTTACCGA CTCAAAAGAG
CGTCACTTGT TTGGTGACTT GTACGAGCAG ATCTTAAAAG ACTTACAAAG CGCTGGTAAT
GCGGGCGAGT TCTATACCCC ACGCGCTATC ACTAAGTTCA TTGTCGCAGT AACAGACCCT
AAGCTTGGCG AGTCTATTAT GGACCCAGCT TGCGGTACTG GCGGCTTCTT AGCATGCGCG
TTTGACCACG TTAAAACTAA CTACGTTAAA TCGGGCGAAG ACCACAAGAC CCTACAGCAA
CAAATCTTTG GTGTTGAGAA AAAGCAGCTG CCACACCTAC TGTGTACCAC CAACATGATG
CTGCACGGTA TTGAAGTACC AGTACAGATT AAGCATGGCA ACACCCTCAA TAAGCCATTA
TCAAGCTGGG ATGACCAAGT TGACGTCATC ATTACTAACC CACCATTTGG TGGCACCGAA
GAAGACGGTA TTGAAAAGAA CTTCCCAAGC GAAATGCAAA CCCGTGAAAC TGCGGATCTA
TTCCTACAGC TAATCATCGA GGTTCTAGCA ACGAAAGGGC GTGCAGCGGT GGTATTGCCA
GACGGCACCC TATTTGGTGA AGGCGTTAAA ACCAAAATCA AAAAGCTGCT GACGGAAGAA
TGTAACCTGC ACACTATTGT GCGTTTACCT AACGGTGTAT TTAACCCATA CACTGGCATT
AAAACTAACA TCCTATTCTT CAACAAAGGC CAGCCAACTA AAGATGTCTG GTTCTATGAG
CACCCATATC CTGCAGGAGT GAAGAACTAC AACAAAACCA AGCCAATGAA GTTTGAAGAG
TTTGCAACTG AATTGAGCTG GTGGGGCGTT GAAACCGACG GTTTTGCATC ACGAGTTGAA
AACGAGCAGG CATGGAAAGT GTCTATCGAT GACATCATCG CTCGCAACTA CAACCTAGAT
ATTAAAAACC CCCATGTAGG TGATGTGGTC AGCCACGATC CACAAGAGTT ACTACAAGAC
TACGCCAAGC AGCAAGCCGA TATTCAATCC TTACGTGAGC AGCTTAAAGA CATTCTTTCT
GCCGCCCTTT CTCCTAAAGA TTCAGCGGGA GAAGTTAGAT AA
 
Protein sequence
MSISSAIKSI QDIMRKDAGV DGDAQRLGQM SWLLFLKVFD AQEEELELEL DDYREPIPEQ 
FLWRNWAADN QGITGEELLD FVNDELFPQL KNLTAPIDKN PRGYVVKEAF SDAFNYMKNG
TLLRQVINKL NEIDFTDSKE RHLFGDLYEQ ILKDLQSAGN AGEFYTPRAI TKFIVAVTDP
KLGESIMDPA CGTGGFLACA FDHVKTNYVK SGEDHKTLQQ QIFGVEKKQL PHLLCTTNMM
LHGIEVPVQI KHGNTLNKPL SSWDDQVDVI ITNPPFGGTE EDGIEKNFPS EMQTRETADL
FLQLIIEVLA TKGRAAVVLP DGTLFGEGVK TKIKKLLTEE CNLHTIVRLP NGVFNPYTGI
KTNILFFNKG QPTKDVWFYE HPYPAGVKNY NKTKPMKFEE FATELSWWGV ETDGFASRVE
NEQAWKVSID DIIARNYNLD IKNPHVGDVV SHDPQELLQD YAKQQADIQS LREQLKDILS
AALSPKDSAG EVR