Gene Swoo_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0463 
Symbol 
ID6114693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp574916 
End bp576262 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content44% 
IMG OID641631947 
Producthypothetical protein 
Protein accessionYP_001758856 
Protein GI170724830 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACT TATTCACCAC CGCCGCCAGT AATATCACCC ACAAGATAAT TATCTTGGTT 
GGCATCTCAC TTCTATCATC AATCCCTCTG GGAATAGTGA TGAACATGAC CTCAGACAGA
CAATACCTCT ACAACGACGT GGTTAATGAA ATAGGACAAT CTTGGGGACC ACAGCAGCGT
ATTTCAGGGC CAGCCCTTGT CATCCCCTAT CGTTACCATA TGGTGCATGA GAAGATCAAT
GATGCAGGTG AACTAGTAAA ATATAAGTCA GAATATCAAA GTGAACTTGT GATACTTCCT
AAAAAGCTAA AGCTGAATAT GGATCTTAAA CATGATTTTC GTTCAAGAGG GATATACCAA
TCATTGGTCT ACAATGCTGC CGTATCTGGT AAAGCCAAAT TTGTTATGAC TGAGTTAGAC
ATTCCAAACC TAATTGAACT AAAAACAGAT AATGCCAGAC TTATATTTGG TATCTCCGCT
AACCAAGCGA TTGAGAAGAT AGAAAGATTA ACCCTCTTAA ATAGCGACGG TAAGGTACTG
CTAACTCAAG CCGAGGCAGG AGTCATGCCC GGTACAGGGT TAGATCGACA ACTTGGACTG
GAACGTGGCT TCCACCAACC CCTCTCAATA AACCTTCAGC AAGATGATTT TGAGGTCGAC
TTTGCTATTG CACTTCGCGG CTCTCAGTCC ATTAGTGCAC TACCTTTGGG TGAACACACA
GATATCGCCA TCACCACAGA TTGGCCCCAC CCAAGCTTCA ACGGGATCTT ACCCACCAAC
AGAGAGATAT CAGATACAGG GTTTAGCGCA GATTGGAAAA TAAGCCACCT AACCCGTAAC
TATCCTCAAG TATTCAGCAG TCATCAAGAT ATCAACCTCA CCGAAGTACA AGCAAGCAGT
CAGCTTTTTG AGCCTGTCAC CCACTACGGA AAGATTGAGC GCTCAGTAAA ATACGGCATG
TTATTTATCG CACTCACCTT TATCGTGCTA TTGATATTTG AATTTGGACA AAACACGCGC
CTTAACTTGG TCCAGTACCT ATTAGTTGGC TGCGCTGTCA CCCTCTTCTA CCTGCTGCTA
CTTTCACTCT CGGAGCATCT AGAGTTTAAC TATGCTTACA CGATTGCCGC ATCCATTCCG
GTGCTATCAG TGTCAGCCTA TGTGGCCAGC GCCACAGCCA GTTATAAAAA GGGCGCGATT
ATCGCCACCA TGCTAACCAG TCTGTATGGC GTTCTCTACT CCATACTAAA ACTGGAAGAT
TACGCGCTAC TAATGGGAAC AGGTTTACTG CTAACCGTGC TGCTTATCTT GATGTTTATT
ACACGCCATA AGAGCATGGA GACTTAA
 
Protein sequence
MLNLFTTAAS NITHKIIILV GISLLSSIPL GIVMNMTSDR QYLYNDVVNE IGQSWGPQQR 
ISGPALVIPY RYHMVHEKIN DAGELVKYKS EYQSELVILP KKLKLNMDLK HDFRSRGIYQ
SLVYNAAVSG KAKFVMTELD IPNLIELKTD NARLIFGISA NQAIEKIERL TLLNSDGKVL
LTQAEAGVMP GTGLDRQLGL ERGFHQPLSI NLQQDDFEVD FAIALRGSQS ISALPLGEHT
DIAITTDWPH PSFNGILPTN REISDTGFSA DWKISHLTRN YPQVFSSHQD INLTEVQASS
QLFEPVTHYG KIERSVKYGM LFIALTFIVL LIFEFGQNTR LNLVQYLLVG CAVTLFYLLL
LSLSEHLEFN YAYTIAASIP VLSVSAYVAS ATASYKKGAI IATMLTSLYG VLYSILKLED
YALLMGTGLL LTVLLILMFI TRHKSMET