Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0449 |
Symbol | |
ID | 6114679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 553934 |
End bp | 555064 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631933 |
Product | Zn-dependent hydrolase of the beta-lactamase fold |
Protein accession | YP_001758842 |
Protein GI | 170724816 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAC TCATTGCTAT CACCCTAACG TTAATTTTCG GAGGCGCCAT GCTAACCATG ACCACATCTT CAATTGAGCC AAGTATTAAT AACGCAAAAG GTACACACCA CAGTGACAAG GGGGGTTACA TCAACACAGC AGCAGATTTC ACTGAAGAGA CGGCAATTTT GCCGCTGTTA ATGCGTTACG CCACAGAGAA GCGAGTCGAT GCTGAACCAG AGCAGATGCA GCCAATTATC GAGCTCACCA GTAAACAGTT AATGGAGCTA CCCAGCGACC AAGATATGGT GATCCGTCTG GGCCACTCGA GTATTTTTAT GCAACTTGAT GGCAAGAAGT GGCTTATCGA TCCAGTATTT AGTGAGCGCG CCTCTCCCTT TAGCTTTATT GGCCCTAAGC GTTTTCACCC AACGCCTATC TCACTTAAGG ATCTGCCAGA GATAGATGGC GTACTGATCA GCCACGATCA CTATGATCAT TTAGATAAGG CGACCATTAA GCACTTAGCC TCTACATCAA CTCAATTTAT CGTGCCTTTG GGAGTCGATA AGCACCTATT GAGATGGGGC GTAGCGGCAA ACAAGGTTCA GTCTCTGGAT TGGTGGGAGT CCTTTAATCT GGGCAGCACT AAGATCACAG CGATGCCAAC TCAACACTTT TCCGGTCGTG GCATATTCGA TAAGAATGAG ACACTGTGGG CTTCATACGT GATTGAATCA CAGCAGAACA AGATCTATTT TAGTGGCGAC TCAGGCTACT TTGCAGGCTT TAAGGAGATT GGCGATCGTT TTGGCCCCTT CACTTTGACC ATGGTCGAAA CTGGCGCCTA CGATGCCGAT TGGCCAACGA TACATATGAC GCCGGAGCAG AGCCTTCAAG CCCATATCGA TCTAAGGGGA GAGACCATGA TGCCTATCCA TAATGGCACC TTCGACCTCG CCTTTCACTC TTGGTATGAA CCATTAGAGC GCATCGTTAA GCTCGCTAAT GACACGGATG TAAAGCTGGC AACACCTATG ATGGGGCAAG GCTTAACGCT GAAAAACAAT CAGCTTAACA CGAGCCAACT AAGCACTACA GAGTATTGGT GGAGAACAGA GACCCAAAGA GAGATGGCAC TGGCGTTGTA A
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Protein sequence | MKPLIAITLT LIFGGAMLTM TTSSIEPSIN NAKGTHHSDK GGYINTAADF TEETAILPLL MRYATEKRVD AEPEQMQPII ELTSKQLMEL PSDQDMVIRL GHSSIFMQLD GKKWLIDPVF SERASPFSFI GPKRFHPTPI SLKDLPEIDG VLISHDHYDH LDKATIKHLA STSTQFIVPL GVDKHLLRWG VAANKVQSLD WWESFNLGST KITAMPTQHF SGRGIFDKNE TLWASYVIES QQNKIYFSGD SGYFAGFKEI GDRFGPFTLT MVETGAYDAD WPTIHMTPEQ SLQAHIDLRG ETMMPIHNGT FDLAFHSWYE PLERIVKLAN DTDVKLATPM MGQGLTLKNN QLNTSQLSTT EYWWRTETQR EMALAL
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