Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0425 |
Symbol | |
ID | 6114655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 525487 |
End bp | 526332 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641631909 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001758818 |
Protein GI | 170724792 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTG ATGCTTTAAG AAGTTTTATC GCTTTTGTGG AAACCGGCAG CTTTACTCGC GCGGCGAAAC AGACACATAA AACACAATCT GCAGTCAGTA TGCAGATGAA GCGCTTGGAG GGGGAGTTGG GTAAAGGTCT GTTTGAGAAG GAGGGGCGAA ACTTAGTTCT CTCTGTTCAA GGGCGACGCC TAGCACTTTA TGCCAAGCCT CTTTTGCAGC TTCATGATGA AACGGTAGCG ACTTTAAAGT CACCAGATGT GAGGCCTCGA TTACACCTTG GTTGCCCAGA TGACTATGCG GACTCTATTT TGCCGTCCAT CGTTAAGTTG TTACATCGCT ATCTACCAAA GTTGGAGCTG CAGATCACTT GTGCTTCCAG TTACCTTATC AGGGTGATGT TAGACAGTGG GGAGCTTGAT GCCGCCATAG TGACTCGCTT GCCTGATTCT GAAGAGGGCT ATCTGCTGAC AACCGATGTG GGTGTGTGGA TAGGTAGTGA AGAGATGGAT ATTACTGCCC AAAATCCATT ACCAATTGTG CTGTTTCAAA AGGATTGTAA GTTTCATTTA GCAGCGATAG ATGGCTTGAT GAAACAGGGA CGGGAATACC GTTTGATGGC CTCAAGTAGC AGTGCTACAG CTATTAAAGG GATGGTTAAA CAAGGGATTG GACTCGGTGC GATGGCTAAG TTGAGTGCAG GACAGGATTG TTTTGTTATC GAGTCTGAGA GTTTACCTCC ATTGCCAAGC ATAGGTATTG CACTGGTTAT CTCATCCCGT GCTCACTCTC CTTTGTCGGC TGAATTGGCG CAGCAGTTAG TAAAAGGATT TACTGAAATG ACATGA
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Protein sequence | MDIDALRSFI AFVETGSFTR AAKQTHKTQS AVSMQMKRLE GELGKGLFEK EGRNLVLSVQ GRRLALYAKP LLQLHDETVA TLKSPDVRPR LHLGCPDDYA DSILPSIVKL LHRYLPKLEL QITCASSYLI RVMLDSGELD AAIVTRLPDS EEGYLLTTDV GVWIGSEEMD ITAQNPLPIV LFQKDCKFHL AAIDGLMKQG REYRLMASSS SATAIKGMVK QGIGLGAMAK LSAGQDCFVI ESESLPPLPS IGIALVISSR AHSPLSAELA QQLVKGFTEM T
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