Gene Swoo_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0393 
Symbol 
ID6114623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp489494 
End bp491572 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content47% 
IMG OID641631878 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_001758787 
Protein GI170724761 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAGC TAAGCAGTTT TAGTATGCTG GCAGTCATAA CAGCCAGTAC ATTTGTATCA 
AGCGCATCAA TCGCAGCAAC ACAAAGAACA CACGACATCA CCACAGACGA CTTTTTCGAT
ATTGGTGGCA TGTCCAACGT TCAACTCAGT CCTAACGGCA AACAAGCGGT TTGGCTCGAG
TCTCGCTGGG ATAAAGAGCT TAATAAAAGT CAGCGCGATC TCTGGTTAAT CGATACTAAA
ACACGTCAAT CCAAACGTAT GACCTTTACC AATGAGAGCG AGTCCAGCCC TCAGTGGAGC
CCTGATGGAC AATACATCTA TTACCTTGGA AAGATAAAAC AGGATAAAGC GAAAGCTCCC
TACAATGGAA AAGCTCAGGT ATTTCGACTC TCAGTCAACA CAGGTGATAG CCAACCTATG
ACCAAAGAGG TCGAGGGTGT TAACCGCTTT CAGCTAAGCC ACGACGGGAA TAGCCTCTAC
TTTTTAACCA GCAAAACCGT CAAAGATAAA GATGAGTGGG CTTCAATGCG CTCGTCACAT
TCAGCACCTA AATATGGTCA TGGCGAGCGT AAAACAAATC CACTCTACCA GCTCGACTTA
CAACACTTTA AGCAGAAGAT ACTGATCGAT GATGACAAGG TGGTTTGGGA GTTTAAGGTC
AATAGCGATG AAAGCAAAAT TGCCCGTATC ACCACAGATG ATAACGAACT TGTTCGCCTA
GAGGGTTGGT CTAACATCGA AATATTCGAC ACTCAAACGG CAACGAATTC CACACTTGTA
GACACCCAAT GGCGAGATGA TGCCCCTTCT CCATACGGCT GGTTGCTGGG TTTATCATGG
CAGGAAAATA ATACTGAGCT TGCCTTTAGA ATCGATTTTG ACGGCCATCC CGGTAAGCTC
TTTATTGCCA ACGCCCGTAA AATGGATGCC CCCTCACTGG AGCTCAAACG CTCAGGTGAC
GTCACGCTAA ACTCAAGCGA TATCAAATGG CGCCCCAACA GCGATGAGAT CTGTTACCGA
GGTGCCGATC ATGGCCGCGT AAAGCTCTTA TGTACCGAGA TTGATGATGG CGAACAGGGC
AAGACTCGCA ACGTTATCCA GGGCGACATG GTGATCGGCA GTTACAGCTT TAGCCAGAAC
GGCAAAACAG TCGCATTTAG TCACAACGGT TTAGATCACT TCTCAGACAT GTTTATTGCC
GATGCCAATC GCAAACGTGC CAAAGCAAAA CGCTTGAGTA ACATCAACCC TCAAGTGGAT
AGTTGGAAAT TACCGCAGAT CTCTATCGTC AAATGGACAG CTCCCGATGG CGCGGTTGTC
GAAGGTATTT TAGACCTACC AGCAGGCTAT AAGAGAGAGG ATGGCCCGCT GCCACTCATA
GTCCAGATCC ACGGTGGCCC AACTTCTGCG ACCCCCTATG CGCTACAACA TAGATCCTAT
GGACGCTCAA CCTTCACCGC AAACGGCTGG GCACTTCTAT CCCCTAACTA TCGCGGTTCG
ACAGGTTACG GCGATAAGTT CTTAACCCAG CTTGTTGGTC GTGAACATGA TATTGAAGTC
AAAGATATTA TGGCGGGTGT CGACCACTTA ATTAATGAGG GGATCGTCGA TGCAGATAAG
ATGGCCGTGA TGGGGTGGAG TAACGGTGGC TACCTCACTA ACGCCCTAAT CAGCACCAAT
AACCGCTTTA AAGCTGCCAG CTCTGGTGCA GGTGTTTTCG ACCAACGTCT GCAGTGGATG
CTTGAGGATA CCCCAGGTCA CGTGGTGAAC TTTATGCAAG GTCTACCTTG GGAGAAACCT
GAAGCTTACA ATCATGGCTC ATCTCTGACC TACGCAGATA AGATAAAAAC GCCAACCTTA
ATCCATATCG GTGAAAACGA TCAGCGCGTA CCACTAGGCC ATGCTCAAGG CCTATATCGC
TCCCTTAAAC ACTACCTAAA TGTACCAGTA GAGCTAGTCG TTTATCCAGG CGAAGGACAT
GGCTTAAGTA AGTATCAGCA CAGAAAAGCT AAGATGGAGT GGGATCAGAA ATGGTTCAAC
CATTATGTTT TAGGTCAAAA AATCTCAGGT AAAGAGTAA
 
Protein sequence
MGKLSSFSML AVITASTFVS SASIAATQRT HDITTDDFFD IGGMSNVQLS PNGKQAVWLE 
SRWDKELNKS QRDLWLIDTK TRQSKRMTFT NESESSPQWS PDGQYIYYLG KIKQDKAKAP
YNGKAQVFRL SVNTGDSQPM TKEVEGVNRF QLSHDGNSLY FLTSKTVKDK DEWASMRSSH
SAPKYGHGER KTNPLYQLDL QHFKQKILID DDKVVWEFKV NSDESKIARI TTDDNELVRL
EGWSNIEIFD TQTATNSTLV DTQWRDDAPS PYGWLLGLSW QENNTELAFR IDFDGHPGKL
FIANARKMDA PSLELKRSGD VTLNSSDIKW RPNSDEICYR GADHGRVKLL CTEIDDGEQG
KTRNVIQGDM VIGSYSFSQN GKTVAFSHNG LDHFSDMFIA DANRKRAKAK RLSNINPQVD
SWKLPQISIV KWTAPDGAVV EGILDLPAGY KREDGPLPLI VQIHGGPTSA TPYALQHRSY
GRSTFTANGW ALLSPNYRGS TGYGDKFLTQ LVGREHDIEV KDIMAGVDHL INEGIVDADK
MAVMGWSNGG YLTNALISTN NRFKAASSGA GVFDQRLQWM LEDTPGHVVN FMQGLPWEKP
EAYNHGSSLT YADKIKTPTL IHIGENDQRV PLGHAQGLYR SLKHYLNVPV ELVVYPGEGH
GLSKYQHRKA KMEWDQKWFN HYVLGQKISG KE