Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0333 |
Symbol | |
ID | 6114562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 426553 |
End bp | 427923 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641631820 |
Product | argininosuccinate lyase |
Protein accession | YP_001758729 |
Protein GI | 170724703 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTAT GGGGCGGAAG GTTTAGTCAA GAGAGTAGCG CACTGTTTAA GTTGTTTAAT GACTCGCTAC CTGTTGATTA TCGTTTAGTT GAGCAAGATA TTGTTGGCTC AATCGCTTGG GCTGCTGCAA TTACCCAAGT AGGGATTTTG AGCCAAGATG AGTGTGAAAA GCTGCAACAG GCATTGAAAG AGTTGTTATC TGAAGTTGAA GGTAATCCTG AGCTTATCTT GGCATCGGGT GCTGAAGATA TTCATAGTTT TGTTGAACAG TCCTTGATTG CTAAAGTTGG TGACTTAGGT AAAAAGCTGC ATACGGGCCG TTCACGTAAC GATCAAGTGG CCACGGATCT TAAACTCTGG TGTAAAAAAG AGGGACAGCA GCAGCTTGTA TTGCTAGCTA AATTAAGAGA AGCCCTGCTT GCATTGGCTG AGCGTGAGCT CGATGCTGTT ATGCCTGGTT ATACTCATCT TCAGCGTGCA CAGCCAGTTG CTTTTGGCCA TTGGTGCCTA GCCTATGTTG AGATGTTTGA GCGTGATATC AGTCGCCTTG AAGATGCATT AAAGCGTGCC GATACCTGTC CGCTTGGAAC CGGTGCCTTA GCGGGGACTG CATATCCGAT GGATAGATAT AAACTTGCTG AATCTTTAGG TTTTGCCTCT CCAACCTTAA ATAGCTTAGA TACCGTATCA GATAGAGATC ACGTGGTTGA GATCTGTAGC GATGCCTCCA TTAGCATGAT GCACTTGAGT CGTATGGCTG AAGATCTAAT CTTCTTTAAT AGCGGTGAAG CTGGATTTAT CGATCTAGAT GATGAGGTCA CCTCTGGTTC ATCTTTGATG CCGCAGAAGA AAAACCCTGA TGCACTTGAG CTTATCCGTG GCAAAACTGG CCGTGTTTAT GGCAGTTTGA TTGGTATTCT CACCACCATG AAGGCGCTGC CGCTTGCGTA TAATAAAGAT ATGCAGGAGG ACAAAGAGGG CTTGTTTGAT GTCATGGACA GCTGGTCGAT CTGTTTAGAG ATGGCTGCGT TAGTACTAAG TGGTTTGAAG GTCAATCGTG AGAATACACT TAAAGCTGCC CAGCAAGGTT ATGCAAACTC TACTGAGCTT GCTGATTATT TGGTCGCAAA GGGGATGCCT TTTAGAGAGG CTCATCATGT TGTCGGTGAG GTTGTTGTAC ATGCGATTAG CGAGCAGAAA CCATTAGAGG ATTTTGCACT TGAACAGCTG CAGTCTTTTG CGAGCATTAT TGAGCAAGAT GTCTATGACT GCTTAACAAT TGAGTCATGT TTAGCTAAAC GTGAGGCGCT TGGTGGAACG GCATTACCAC AAGTTCAGTC AGCATTAGCG GCTAAAAAGG TTAAAAAATA G
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Protein sequence | MALWGGRFSQ ESSALFKLFN DSLPVDYRLV EQDIVGSIAW AAAITQVGIL SQDECEKLQQ ALKELLSEVE GNPELILASG AEDIHSFVEQ SLIAKVGDLG KKLHTGRSRN DQVATDLKLW CKKEGQQQLV LLAKLREALL ALAERELDAV MPGYTHLQRA QPVAFGHWCL AYVEMFERDI SRLEDALKRA DTCPLGTGAL AGTAYPMDRY KLAESLGFAS PTLNSLDTVS DRDHVVEICS DASISMMHLS RMAEDLIFFN SGEAGFIDLD DEVTSGSSLM PQKKNPDALE LIRGKTGRVY GSLIGILTTM KALPLAYNKD MQEDKEGLFD VMDSWSICLE MAALVLSGLK VNRENTLKAA QQGYANSTEL ADYLVAKGMP FREAHHVVGE VVVHAISEQK PLEDFALEQL QSFASIIEQD VYDCLTIESC LAKREALGGT ALPQVQSALA AKKVKK
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