| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0289 |
|---|
| Symbol | |
|---|
| ID | 6114515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 357117 |
|---|
| End bp | 357848 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641631773 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001758685 |
|---|
| Protein GI | 170724659 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.563834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGAA CACGTACAGC GAATAATCAA TATACTCACA AAATTTTACT CGTTGAAGAT
GAGCCGGATC TTGCGAATTT AGTCAAACTC AACCTCAACA CTCTCAATTT TGATGTTATT
CACTGCACTA CCCTAAAGCA GGCAAACCAA AACCTAGAGC TTAAGAGTTT TGATCTTATC
TTAATCGATC GAACCCTTCC TGATGGAGAT GGACTTATGC TGTGCCAACA ACTTCGTCAT
GCTGGAAAAG AGACACCTTG CATGATGTTG ACAGCCAAAG ACTCTGAAGC AGATATCGTG
CTGGGGCTTG AATCTGGAGC TGATGACTAC CTGACAAAAC CATTTAGTGT GCTTGAGCTT
AGGGCCAGGG TAAAAGCCCT GCTTAGACGA GGCCATCAAA CTGAACATGA AGAGCAACAG
TTGGACTTCA ATGGTATTAC TATCAACTGT GACACGCGAG AAGTTATCGC CTTCGACACA
CAACTTGAGT TAACCGCCAG AGAGTTTGAC CTCCTCCTGT TTATGGCTAA GCACCCTAAG
CAGGTATTTA GTCGATTGCA GCTATTAGAA GCCGTTTGGG GTTACTCCTA CTCAGGCTAT
GAACATACAG TAAATAGCCA TATAAACCGC CTACGTGCCA AGCTATCCCA TTGCACTCCC
GCTGCTGAGC TTGTTAAAAC AGTATGGGGA GTAGGCTATA AATTCTCACC ACCAGAAACA
CGGTCACATT AA
|
|---|
| Protein sequence | MNGTRTANNQ YTHKILLVED EPDLANLVKL NLNTLNFDVI HCTTLKQANQ NLELKSFDLI
LIDRTLPDGD GLMLCQQLRH AGKETPCMML TAKDSEADIV LGLESGADDY LTKPFSVLEL
RARVKALLRR GHQTEHEEQQ LDFNGITINC DTREVIAFDT QLELTAREFD LLLFMAKHPK
QVFSRLQLLE AVWGYSYSGY EHTVNSHINR LRAKLSHCTP AAELVKTVWG VGYKFSPPET
RSH
|
|---|
| |