Gene Swoo_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0284 
Symbol 
ID6114510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp349707 
End bp350372 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content42% 
IMG OID641631768 
Product2-deoxyglucose-6-phosphatase 
Protein accessionYP_001758680 
Protein GI170724654 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00458991 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATCAC CACTAATTAA AGCTGTTATT TTCGACATGG ATGGGGTGTT AATAGACTCT 
GAACCGGCTT GGCAATTAGC TGAATATCAA ACAATGAGAA ACCAGGGTTT AAAGATCAGC
TACCAAGATA CACTACAAAC AACTGGCCTT AGAATCGATG AAGTCGTCAG TTACTGGTAT
CAGCGTTTTC CATGGAAGGA CTATGACAAC CCTAAAACTG CCACAGAGAT AGTAAACAAG
GTTGTTCAGC ACATATTAGA TGATGGTACG GCTATGCAAG GCGTATTCAA AGCTCTGGAT
TTTTGTGAGG CAAACGGGCT AAAAATAGGA TTAGCCACCT CCTCATCACA AGCCATCATT
CAAGCAGTTT TAAACAAACT GGAGATAGGA CACTACTTTA GTTCAATTCA ATCAGCAGAG
CACCTAAATC GCGGAAAACC GCATCCAGAG GTCTACCTTA ATTGCATTGA TGACCTGGAA
CTGTCTTGCT CACAATGTGT TGCAATCGAA GACTCATTCA ATGGACTTAT TGCAGCTAGG
GCTGCAAATA TGCAAACCAT TGCGATCCCA GCACCAGAGC AGAAAAATGA TCAAAAATGG
ATCATCGCTC ATAAGCAATT AGACTCGCTA CTTGAGCTTC CTGAGTACTT ACAAGATAAG
TTTTAG
 
Protein sequence
MASPLIKAVI FDMDGVLIDS EPAWQLAEYQ TMRNQGLKIS YQDTLQTTGL RIDEVVSYWY 
QRFPWKDYDN PKTATEIVNK VVQHILDDGT AMQGVFKALD FCEANGLKIG LATSSSQAII
QAVLNKLEIG HYFSSIQSAE HLNRGKPHPE VYLNCIDDLE LSCSQCVAIE DSFNGLIAAR
AANMQTIAIP APEQKNDQKW IIAHKQLDSL LELPEYLQDK F