Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0283 |
Symbol | |
ID | 6114506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 342497 |
End bp | 343366 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641631764 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_001758679 |
Protein GI | 170724653 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000135254 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000557586 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCAAA CTTCCCAATA CGATTTCTGG GTCAAGTTAG CTAGCCGCGC AGCTGTGGCT ACTGCCTTGA CCTTAGTTAT TATCAAAATG GCAGCCTGGC TATATTCTGG CTCTGCTAGC ATGTTAGCCT CACTGACTGA CTCTTTTGCC GATGGGCTTG CTTCACTCGT TAACTTTGCT GCTATTCGCT ATGCTATTGT CCCTGCGGAT CATGATCACC GTTATGGTCA TGGCAAGGCT GAACCCCTAG CTGCACTCGC TCAATCTGCC TTTATCTTAG GTTCTGCTTT TTTGCTGCTA TTCCATGGCG GAGATCGTTT AATTAATCCT GCTCCGATTA ACCATGCCAT GTTAGGTGTT GTTGTCTCCA TTATTGCTAT CGTGCTTACT TTTGCTTTGG TTATGTTGCA GAAGAAAGCT GTAGAGGCAA CATCAAGTAC AGTGGTTGAA GCTGACGCAC TCCATTATAA GTCCGATTTA TTTCTAAATG CGGCCGTGCT GTTAGCGCTT GTACTTGCAC AATATGGTTG GTGGTGGGCC GATGGACTAT TTGCGATCTT AATTGCACTC TTTATTGGTC AACAGGCGTT AGAGCTCGGT TATCGCTCTA TCCAGTCGCT ACTGGATAGA GAATTAGATA ATGATACTCG TTTGAAAATT GTAGAACTTG CTCAAGAGGA TCCACAGGTT AAAGGGATAC ATGATTTGAG AACCCGTGAA TCAGGTAAGA CGACCTTTAT TCAATGTCAT CTTGAGATAG AGGGCTCGTT AAGCTTAAGA GAGGCCCATG CTATTGCCGA TAGAACTGAA GCAAGAATAC GAGCCGCTTT CGATGATGCT GAAGTTATCA TCCATCAAGA CCCCGTCTGA
|
Protein sequence | MTQTSQYDFW VKLASRAAVA TALTLVIIKM AAWLYSGSAS MLASLTDSFA DGLASLVNFA AIRYAIVPAD HDHRYGHGKA EPLAALAQSA FILGSAFLLL FHGGDRLINP APINHAMLGV VVSIIAIVLT FALVMLQKKA VEATSSTVVE ADALHYKSDL FLNAAVLLAL VLAQYGWWWA DGLFAILIAL FIGQQALELG YRSIQSLLDR ELDNDTRLKI VELAQEDPQV KGIHDLRTRE SGKTTFIQCH LEIEGSLSLR EAHAIADRTE ARIRAAFDDA EVIIHQDPV
|
| |