Gene Swoo_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0283 
Symbol 
ID6114506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp342497 
End bp343366 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID641631764 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001758679 
Protein GI170724653 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000135254 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000557586 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCAAA CTTCCCAATA CGATTTCTGG GTCAAGTTAG CTAGCCGCGC AGCTGTGGCT 
ACTGCCTTGA CCTTAGTTAT TATCAAAATG GCAGCCTGGC TATATTCTGG CTCTGCTAGC
ATGTTAGCCT CACTGACTGA CTCTTTTGCC GATGGGCTTG CTTCACTCGT TAACTTTGCT
GCTATTCGCT ATGCTATTGT CCCTGCGGAT CATGATCACC GTTATGGTCA TGGCAAGGCT
GAACCCCTAG CTGCACTCGC TCAATCTGCC TTTATCTTAG GTTCTGCTTT TTTGCTGCTA
TTCCATGGCG GAGATCGTTT AATTAATCCT GCTCCGATTA ACCATGCCAT GTTAGGTGTT
GTTGTCTCCA TTATTGCTAT CGTGCTTACT TTTGCTTTGG TTATGTTGCA GAAGAAAGCT
GTAGAGGCAA CATCAAGTAC AGTGGTTGAA GCTGACGCAC TCCATTATAA GTCCGATTTA
TTTCTAAATG CGGCCGTGCT GTTAGCGCTT GTACTTGCAC AATATGGTTG GTGGTGGGCC
GATGGACTAT TTGCGATCTT AATTGCACTC TTTATTGGTC AACAGGCGTT AGAGCTCGGT
TATCGCTCTA TCCAGTCGCT ACTGGATAGA GAATTAGATA ATGATACTCG TTTGAAAATT
GTAGAACTTG CTCAAGAGGA TCCACAGGTT AAAGGGATAC ATGATTTGAG AACCCGTGAA
TCAGGTAAGA CGACCTTTAT TCAATGTCAT CTTGAGATAG AGGGCTCGTT AAGCTTAAGA
GAGGCCCATG CTATTGCCGA TAGAACTGAA GCAAGAATAC GAGCCGCTTT CGATGATGCT
GAAGTTATCA TCCATCAAGA CCCCGTCTGA
 
Protein sequence
MTQTSQYDFW VKLASRAAVA TALTLVIIKM AAWLYSGSAS MLASLTDSFA DGLASLVNFA 
AIRYAIVPAD HDHRYGHGKA EPLAALAQSA FILGSAFLLL FHGGDRLINP APINHAMLGV
VVSIIAIVLT FALVMLQKKA VEATSSTVVE ADALHYKSDL FLNAAVLLAL VLAQYGWWWA
DGLFAILIAL FIGQQALELG YRSIQSLLDR ELDNDTRLKI VELAQEDPQV KGIHDLRTRE
SGKTTFIQCH LEIEGSLSLR EAHAIADRTE ARIRAAFDDA EVIIHQDPV