| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0278 |
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| Symbol | |
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| ID | 6114501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 337981 |
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| End bp | 338856 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631759 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001758674 |
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| Protein GI | 170724648 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.676555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000195953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTAAAAA TCGAATTGCT TGAAAGCTTC ATTGCTATCG CCGAGAGTGG CAACCTATCA
AAAGCAGCTG AGAAAATATG TCGTACTCAA TCAGCATTAA GCTTACAGAT TAAGAAATTA
GAGGAGAGTG TTGGTCAGCC TTTACTCCAC CGTGACAACA AGGGCGTCAC TCTTACCGCT
TCAGGAAAGA CACTGCTTAA TTATGCTTAT AAGATGATGC AACTGAGTTC AAAAGCACTC
GATGACCTGA AGGAGTGTCA GAACCGAGAA TCTATACGTT TAGGCGTTCC TACCGATTAC
ATCAACCGTT ACCTTGGTAG CTGCTTATTA GAGTTTATTC GCGAATTCAC CTGTATAGAG
TTAATTATCG ATACTGATGT CAGCGGTAAT CTCTATAAAC GTTTACATAA TGGTGAGTTT
GATCTGATTG TCGCCACTCA CTGGCATCCA CCAGCAGCAG GCCATGGCGA ATTGCTATTT
GAACGTCGTT TTCATTGGGT CGCCGCAAAA GGTGGCAACG CCCATAAACG GGAGACAATA
CCTATGGCGC TGTACCCCGA AAATTGCCCC ATCCGAGCTC AGGTGTTTGC CAATCACCAA
ATCTCAATGC GTCCAATGAG CGTACTGCTA TCGACTCCCT CACCAGCAGC CATGTGTATG
GCAGTGGAAA ACGATCTGGT AATAGCTCCT ATTGCAGAGT TTCGCATTAA CGATAAAATG
CAGATCATCG ATCCCGTAGA GCACAACATT CCCTCACTAC CAGTCTTCAA TGAGTCTTTG
TATCTCAACC CTGATACACA AACCGAAGCA ACCAATCAGT TAATCGACTT AATCAAAGCG
AACGTAAAAG AGCTAGGTGA AGTGCCACTT AATTAA
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| Protein sequence | MLKIELLESF IAIAESGNLS KAAEKICRTQ SALSLQIKKL EESVGQPLLH RDNKGVTLTA
SGKTLLNYAY KMMQLSSKAL DDLKECQNRE SIRLGVPTDY INRYLGSCLL EFIREFTCIE
LIIDTDVSGN LYKRLHNGEF DLIVATHWHP PAAGHGELLF ERRFHWVAAK GGNAHKRETI
PMALYPENCP IRAQVFANHQ ISMRPMSVLL STPSPAAMCM AVENDLVIAP IAEFRINDKM
QIIDPVEHNI PSLPVFNESL YLNPDTQTEA TNQLIDLIKA NVKELGEVPL N
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