Gene Swoo_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0262 
Symbol 
ID6114485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp319928 
End bp320608 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content41% 
IMG OID641631743 
Producthypothetical protein 
Protein accessionYP_001758658 
Protein GI170724632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000492354 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCATCGC TTCAAGCCTT TTTATTTTTA TCTGTGGCAT CTATGGAGCC TGTTATTTCT 
GCTTTGCTGT TCTACACTTT AATTCAAAGA GATGAAGGAT TGGAGAAAGA CGTGGTAACT
AAAAGCTCAG ATAGTATGTT TGAGAACATA CACGCTTTCG AAGGTGATGA TGCTATTGAT
TGGTGTCATA TCAGGGAAAG TATAAAAGTA TTGATATTGG CGATGGCACA GATAGAGCTG
TCATTGACCG ATGGTGAGCA TAATGTGACT AACTTAGGAG CATTGTTTAC CGACATGGCT
GATCATTTAG GCGAGGTGAA TGACTTTCTG TCTACGCAGA GTGATACTCC TGTTTTAGTG
ATGGCTCATA GCACCATTTT GGTGGATAAA GTGAATGAAG GTGTGGTGGC TTTTCAGTTC
TATGATCGTA TATCACAACG TCTTCAGCAT GTGATCATGG GTCTGGCTTT GATGGAGGAG
GTGCTGAGCA GTAAAGAGCG CCGTACATCT CAAGATGCAT GGAAGAAGCT GCAGGAGGGG
ATTCAGGAGA GTTATTCCCT TGACTGTGAG AGAAAGATGT TTGATCTTCT TCTTAAAGGA
ACACCTGTTC ATGAAGCGTT AAAGCTTTAT AAAGAGGAGT ATCAAAAAGA AGAGACTGAG
GATGATATTG AGTTGTTCTA A
 
Protein sequence
MASLQAFLFL SVASMEPVIS ALLFYTLIQR DEGLEKDVVT KSSDSMFENI HAFEGDDAID 
WCHIRESIKV LILAMAQIEL SLTDGEHNVT NLGALFTDMA DHLGEVNDFL STQSDTPVLV
MAHSTILVDK VNEGVVAFQF YDRISQRLQH VIMGLALMEE VLSSKERRTS QDAWKKLQEG
IQESYSLDCE RKMFDLLLKG TPVHEALKLY KEEYQKEETE DDIELF