Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0262 |
Symbol | |
ID | 6114485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 319928 |
End bp | 320608 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641631743 |
Product | hypothetical protein |
Protein accession | YP_001758658 |
Protein GI | 170724632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000492354 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCATCGC TTCAAGCCTT TTTATTTTTA TCTGTGGCAT CTATGGAGCC TGTTATTTCT GCTTTGCTGT TCTACACTTT AATTCAAAGA GATGAAGGAT TGGAGAAAGA CGTGGTAACT AAAAGCTCAG ATAGTATGTT TGAGAACATA CACGCTTTCG AAGGTGATGA TGCTATTGAT TGGTGTCATA TCAGGGAAAG TATAAAAGTA TTGATATTGG CGATGGCACA GATAGAGCTG TCATTGACCG ATGGTGAGCA TAATGTGACT AACTTAGGAG CATTGTTTAC CGACATGGCT GATCATTTAG GCGAGGTGAA TGACTTTCTG TCTACGCAGA GTGATACTCC TGTTTTAGTG ATGGCTCATA GCACCATTTT GGTGGATAAA GTGAATGAAG GTGTGGTGGC TTTTCAGTTC TATGATCGTA TATCACAACG TCTTCAGCAT GTGATCATGG GTCTGGCTTT GATGGAGGAG GTGCTGAGCA GTAAAGAGCG CCGTACATCT CAAGATGCAT GGAAGAAGCT GCAGGAGGGG ATTCAGGAGA GTTATTCCCT TGACTGTGAG AGAAAGATGT TTGATCTTCT TCTTAAAGGA ACACCTGTTC ATGAAGCGTT AAAGCTTTAT AAAGAGGAGT ATCAAAAAGA AGAGACTGAG GATGATATTG AGTTGTTCTA A
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Protein sequence | MASLQAFLFL SVASMEPVIS ALLFYTLIQR DEGLEKDVVT KSSDSMFENI HAFEGDDAID WCHIRESIKV LILAMAQIEL SLTDGEHNVT NLGALFTDMA DHLGEVNDFL STQSDTPVLV MAHSTILVDK VNEGVVAFQF YDRISQRLQH VIMGLALMEE VLSSKERRTS QDAWKKLQEG IQESYSLDCE RKMFDLLLKG TPVHEALKLY KEEYQKEETE DDIELF
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