| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0204 |
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| Symbol | |
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| ID | 6114427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 253836 |
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| End bp | 254687 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631685 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001758600 |
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| Protein GI | 170724574 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000789244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000216818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTAATC AATCAATGGC ACTTACGGTT CCTCACGGAA GCGGTAGCTT AGAGGCTTAT
GTCCACTCTG CGCACAACAT CTCGATGTTG GAGCCGGAGC AGGAGTATGA GTTAGCTAAG
CGATTACAAG AAACAGGTGA TCTTCAGGCT GCGAAACAGC TCATTATGTC TCACCTACGT
TTTGTAGTGC ATGTTGCTAA AGGTTACTCA GGTTATGGTC TTCCTCAGGC TGATCTTATC
CAAGAGGGTA ATATTGGTTT GATGAAAGCG GTGAAGCGTT TCGACCCAGA TGTGGGCGTT
CGATTGGTTT CATTTGCTGT GCATTGGATC AAAGCTGAAA TTCATGAATA TGTGCTGAAA
AACTGGCGCA TAGTAAAGGT TGCGACAACT AAAGCACAGC GTAAGTTGTT CTTTAACCTT
CGTAAATCTA AAAAACGTCT CGGTTGGTTT AGTGATGAAG AGGTTGGCAT GGTTGCCGAT
AACCTTGGTG TCTCTAAAGC CGATGTGACT GAGATGGAAT CGCGTATGGC GGCACAAGAT
CCTGCATTCG ATCTTGCCAG CGACAACGAT GATGACCAAG ACTTCTCTCC GGTTCACTAT
TTAGAGGACC ACTCCTCAGA TCTGGCATCA CAAGTTGAAA ATGATAACTT AGAGTCAAAT
AACCAAGCGC GCCTACTGTC AGCCATCAAA ACCTTAGATG AGCGTAGTCA GCATATCCTG
CAAGCACGCT GGTTAAATGA AGATAAGACA ACGCTACAAG AACTTGCTGC AACATACCAA
GTCTCTGCTG AGCGTATTAG GCAACTTGAA AAGAATGCTA TGAACAAGCT TAAAGGACGA
ATGGAAGCGT AA
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| Protein sequence | MTNQSMALTV PHGSGSLEAY VHSAHNISML EPEQEYELAK RLQETGDLQA AKQLIMSHLR
FVVHVAKGYS GYGLPQADLI QEGNIGLMKA VKRFDPDVGV RLVSFAVHWI KAEIHEYVLK
NWRIVKVATT KAQRKLFFNL RKSKKRLGWF SDEEVGMVAD NLGVSKADVT EMESRMAAQD
PAFDLASDND DDQDFSPVHY LEDHSSDLAS QVENDNLESN NQARLLSAIK TLDERSQHIL
QARWLNEDKT TLQELAATYQ VSAERIRQLE KNAMNKLKGR MEA
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